Metabacillus dongyingensis: K8L98_13780
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Entry
K8L98_13780 CDS
T07997
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8L98_13780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdg03019
]
K8L98_13780 (recQ)
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_13780 (recQ)
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8L98_13780 (recQ)
Messenger RNA biogenesis [BR:
mdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8L98_13780 (recQ)
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K8L98_13780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
GerE
HHH
zf-CXXC
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UAL54741
LinkDB
All DBs
Position
complement(2774384..2776507)
Genome browser
AA seq
707 aa
AA seq
DB search
MLLQQAKEHLQHYFGYSSFRPGQEEIISSVLNGNHSAGIMPTGGGKSICYQIPALLFSGI
TLVISPLISLMKDQVDSLDQAGIPATFLNSTLSQTETSARLLDLAAGKYRILYVAPERLE
SSLFLEQLQKMNVSMVAVDEAHCISQWGHDFRPSYLRIKDLKTELKSNPVFLALTATATP
IVKEDICTSLGIQEQYTTVTGFERGNLSFNISKGENRYDFIERYIANNSTESGIIYAATR
KEADHIYERLIKKGIQAGRYHGGMSDVQRGLQQDLFLKDDILVMVATNAFGMGIDKSNVR
YVIHYQLPKNMESYYQEAGRAGRDGLDSECFLLYSPQDIQIQRYLIEQSTFQKERQQAEL
VKLHQMRDYCHTEGCLQAFILNYFGDSEAEPCGKCSNCRDERMHEDVTKEAQMVLSCMIR
MGQRFGKTMISQVLTGSSNKKVIDFKFNELSTYGILKHQTAKEVSEFIDFLTSEQYISIT
GGQFPVLVVEEKGLEVLKGHLEVHRKEKMRIVEAAANDGLFMQLKELRKQLATEENVPPF
VIFSDKSLKDMSAKMPKSLEEFLAVQGVGEAKQQKYGEIFIGKITAYVNENPNIEQPAQT
LVPVKKERKESSHLDSLQLYKEGLNVNEIAEKRDLSVITIENHLLRCAKEGLDIDFDAWI
PAKYEMQIEEAIRTHGYGLLKPLKESLPDEVTYFMIKAAIVRRELVH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
attttgttacaacaagcgaaagagcatttgcagcactattttggttattcatcattccgt
ccgggacaggaagaaattatcagcagcgttttgaatggaaatcattcagcaggcattatg
ccgactggaggcggaaagtccatctgctatcaaatacccgcactcttattttctggcatt
accctcgtcatttctccccttatttcactcatgaaagatcaggtggactctcttgatcaa
gcaggaatccctgctaccttcctcaatagcacactctctcaaacagaaacaagtgccagg
ctattagatttagcagcaggaaagtatcgaattttatatgttgcgcctgaaagattggaa
tcatctttgtttttagagcagctgcaaaaaatgaatgtttcaatggttgctgttgatgaa
gcccactgtatctcccaatggggtcatgatttccggccgagctatttaagaataaaagat
ttaaaaacggagcttaaatcaaatcccgtttttctggcattgacagctacagcgactcca
attgttaaagaagatatatgcacctcacttggaatccaagagcaatacacaactgtaaca
ggatttgagaggggaaatttgtcattcaatataagcaaaggtgaaaacagatacgacttt
attgaaagatacatagctaataacagcaccgagtcaggaataatatacgctgctacaaga
aaagaagcagatcacatatatgagcggcttattaaaaaaggaattcaagcagggagatat
cacggggggatgagtgatgtgcagcgcggtctgcagcaggacctgttcttgaaggatgat
attcttgtaatggtagctaccaatgcattcggcatgggaattgataaatcaaatgtcaga
tatgtcattcactatcagcttcctaaaaatatggaaagctattaccaggaggcggggaga
gcgggaagagatggtttagacagtgaatgctttctgttgtattccccgcaggatattcaa
atacagcgttatttaatcgaacaatctaccttccagaaagaaagacagcaggccgagctt
gttaaactgcatcaaatgcgcgattattgtcatacagaagggtgtcttcaagcatttatt
ctgaattattttggtgacagtgaagctgaaccgtgcggcaaatgcagcaattgcagagac
gagcgcatgcatgaggatgtaacaaaagaagcgcagatggttctctcatgtatgatcaga
atggggcaaagattcggtaaaaccatgatcagtcaggtgctgacgggttcttcaaacaaa
aaagtgatcgattttaaatttaatgagctttcaacttatggcatcttaaaacaccagaca
gcaaaagaagtcagcgaatttattgattttcttacatctgagcagtatatttcaataact
ggcggtcaattccccgttcttgtagtcgaagagaagggactagaggttctaaagggccat
ttagaagtgcaccgaaaggaaaaaatgcgtattgttgaagctgcagcgaatgacgggctg
ttcatgcagcttaaagaactgagaaagcagcttgcaacagaggaaaatgttccgccattt
gttattttctcagataaatccttaaaggatatgagtgccaaaatgccgaagtcactggaa
gaatttcttgcagttcagggggttggagaagctaaacagcaaaagtatggtgaaattttt
attgggaaaataacagcatatgttaacgagaaccctaatattgagcagccggctcaaacg
ctggttcctgttaaaaaagagcgaaaagaatcatctcatctggactccctgcaattgtac
aaagaaggtctgaatgtaaatgaaattgctgaaaaaagagatttgtcggtgattacaatt
gaaaatcatttacttcgctgtgccaaagagggacttgacattgattttgatgcctggatc
ccagccaagtatgaaatgcaaatcgaagaggcgatccggacacacggctatggcctgctg
aagccgctgaaagaaagccttcctgatgaggtgacctattttatgattaaagcggccatt
gtaagaagagagctggttcattaa
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