Metabacillus dongyingensis: K8L98_16660
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Entry
K8L98_16660 CDS
T07997
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8L98_16660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdg03019
]
K8L98_16660
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_16660
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8L98_16660
Messenger RNA biogenesis [BR:
mdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8L98_16660
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K8L98_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DUF1319
CO_dh
Motif
Other DBs
NCBI-ProteinID:
UAL50851
LinkDB
All DBs
Position
complement(3381447..3382922)
Genome browser
AA seq
491 aa
AA seq
DB search
MNVQEALKRHFGHDTFRTGQENIIIDLIAGNDTIALLPTGGGKSLCYQLPAYILEGTVLI
ISPLLSLMEDQIQQIRMRGEKRVIGLNGALSYMERQKALLNLNQYKYIFASPEILQSEAV
ASALRNINLSLFVVDEAHCISQWGHDFRTDYSKLGELRGKLGQAPCIALTATATPEVLKD
IESSLQMKNAKMHIQSVNRSNIAIMIEECHSLENKMKRVSELVKKLKGPGIIYCSSRKWT
ENLEQFLKMEGVHDTACYHAGMEQEQRTLIQQQFVYDQLEVVCCTNAFGMGVNKGNVRYV
IHFHFPAQMESYVQEIGRAGRDGLPSVAISLIGSGDMEIPLALLESEFSTYEQLHQTLYL
LSAGTEAEEAFERTGVNEVQGRFILHHLEKLSYPLPGNEQQSLNVIWGKIEDRRKFKKRK
LNAVMKWLLSKECRRQGILKYFEEKNLQTQEICCDRCGLDLLKYEEREEKHTHLQLLEWK
AELKAIFGQSE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcaagaagcattaaagcgccatttcggccatgatacctttcgaactggccag
gaaaacatcatcattgaccttatagccggcaatgatacaatagccctgcttccgactgga
ggagggaaatcactgtgctatcagctgcctgcgtacattctggaaggaacggttctgatc
atttccccgcttctttcactaatggaagatcagatccagcaaattcgaatgcgcggagaa
aaaagggttattggcttaaacggtgctctctcttatatggaaaggcaaaaagcattgctt
aacctgaatcaatacaaatatatttttgcatccccagaaattctgcagtcagaagccgtt
gcttctgcacttcgtaacattaacctatctttatttgttgttgatgaagctcactgcatt
tcacaatggggccatgatttcagaacggattactcaaagctcggtgagttaagaggaaaa
cttggccaggcaccgtgcatagccctgacagcaactgcgactcctgaagtacttaaggat
attgagagttctctgcagatgaagaacgcgaaaatgcatattcaatcagttaatcgcagc
aatatagcaattatgattgaggaatgtcattcgcttgaaaataaaatgaaaagagtttct
gagctggttaaaaagctgaaagggccagggattatatactgctcaagcagaaaatggact
gaaaacctagagcagtttttaaaaatggaaggcgttcatgatacagcctgctatcatgca
gggatggagcaagagcaaaggacccttatacagcagcagtttgtttatgatcaattagaa
gtagtttgctgtacaaatgcatttggaatgggtgttaataaaggaaatgtcagatatgtc
atccattttcattttccggctcaaatggaatcatacgttcaggaaatagggagagctgga
agagacggtctgccaagtgtagcgatatctcttattggaagcggagatatggaaatacca
ttggccctgctggaatcggaattttcaacatatgaacagcttcaccagaccctttatctt
ctctcagcaggtacggaagctgaggaagcatttgaacggactggtgtaaatgaagttcag
ggaaggtttattctgcatcatttagaaaagctttcttatcctctgcccggaaatgaacaa
caatcgttaaatgtaatatggggaaaaattgaagacaggcgaaaattcaaaaagagaaaa
ctaaatgccgtaatgaaatggttgctttcaaaagaatgcaggagacagggcattctcaaa
tactttgaggaaaagaatttacaaacacaggagatttgctgtgacaggtgcggacttgat
cttttgaagtacgaagaaagggaagagaagcatactcatttgcagctccttgagtggaag
gcagaattaaaggctatatttggccagagcgagtga
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