Metabacillus dongyingensis: K8L98_16980
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Entry
K8L98_16980 CDS
T07997
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8L98_16980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdg03000
]
K8L98_16980
Transcription factors [BR:
mdg03000
]
Prokaryotic type
Helix-turn-helix
Other families
K8L98_16980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_12
TPR_10
TPR_8
VPS18_solenoid_1st
TPR_1
HTH_19
Motif
Other DBs
NCBI-ProteinID:
UAL50913
LinkDB
All DBs
Position
3440526..3441767
Genome browser
AA seq
413 aa
AA seq
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MYEGKIIKFYREKNKITQEQLGKGICSGTHISKIERLHTEYAPEIVTLLSERLGINMKYE
ITKLRNLKDRLYQWQDVIIMQLFDEMDLINDELEKEDLIQISEYINLYQLLRVRYLLMHN
LPDDAFNIIHGIQKNEHKLSSYEANLLKHVLGIYYLAKHENLHAVHTLKSIDESDYNNKE
YTYHLAAAYHSIESPVMAYYYADKSRQFFKEINNYLRVIDAEMLMLIQVKDDGEFKETIQ
RFQNLIKSCELCHSPVRKARVLHNLAFEYFRRNKFELACKYYKESMSLKDNDSSPYLLSL
DGYIRSSLNGSILTREELIHLVKEGLETAIKKNERLFIILFNLLSFLIEEKEKEYHQYLC
DQALPMFTQFGFVYLIQRSKKELFNYYIKFKQTNKALKMAELLINHEKKSCHL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaaatcataaaattttatcgtgaaaaaaataaaataactcaagagcaa
ttaggaaaaggtatttgttctggtactcatattagtaaaattgagcgtttacacactgaa
tatgcccctgaaattgtcacccttttatcagaacgtctaggtataaatatgaaatatgaa
ataacaaaactccgtaatcttaaagatcgcttatatcaatggcaggatgttattatcatg
caattatttgatgaaatggatcttatcaatgatgaacttgaaaaagaagatttaattcaa
atctcagagtatataaatctttatcaattacttcgagtcaggtacttactgatgcataat
ttacccgatgatgcttttaatatcatccatggaatccaaaagaatgaacataaattatca
tcctacgaagccaacttattaaaacacgtattaggcatttactatttagcaaaacatgaa
aatcttcatgcagtccatacactaaaatctatcgatgaatcagactacaataacaaagaa
tatacctaccatctagcagctgcataccattccattgaatcacctgtcatggcttattat
tacgcagataagtcgcgtcaattttttaaagaaattaataactatcttagagtgattgat
gcagaaatgcttatgctgatccaagttaaagatgatggcgaatttaaagagacgattcaa
aggttccaaaacctgatcaaaagctgcgaactttgtcattcacctgttcgaaaagcaagg
gtattacacaacttagcttttgaatacttcagacggaataaatttgagcttgcgtgtaag
tactataaagagtcaatgagtctcaaagataatgattcaagtccttatttactatcttta
gacggatatattagaagttcattaaatgggagcatacttactcgagaggaactaatacat
cttgttaaagagggacttgaaactgctataaagaaaaatgaaagactttttattatctta
tttaatctacttagttttttaattgaagagaaagaaaaagaataccatcaatacttatgt
gatcaagctttaccaatgtttacacaatttggctttgtctatttgatccagcgttcaaaa
aaagaattgtttaactattacattaaatttaaacaaactaataaagccttaaaaatggcg
gaattgctaatcaatcatgaaaaaaagtcatgtcacttatga
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