Metabacillus dongyingensis: K8L98_24295
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Entry
K8L98_24295 CDS
T07997
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8L98_24295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdg03019
]
K8L98_24295
03009 Ribosome biogenesis [BR:
mdg03009
]
K8L98_24295
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K8L98_24295
Messenger RNA biogenesis [BR:
mdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8L98_24295
Ribosome biogenesis [BR:
mdg03009
]
Prokaryotic type
rRNA helicases
K8L98_24295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
UvrD-helicase
PHD_like
Motif
Other DBs
NCBI-ProteinID:
UAL54900
LinkDB
All DBs
Position
complement(4925013..4926236)
Genome browser
AA seq
407 aa
AA seq
DB search
MTFSALGISDRLNKALKHQGISSPTQIQEKAIPAVLKGEDIIAKAQTGTGKTLAFVLPIL
EKINTEDKEVQALIITPTRELAIQITAEIKKITDRLNEAGVLAIYGGQDVERQIKKLGRG
IHIAVGTPGRILDHIRRETIDLSKVSTLVLDEADQMLQAGFQKDIEEIIAQTFDSRQTLL
FSATITNKVRDLSRQYMTNPKDITVQEKQITVEKITQLVVETNDRAKQAALFRFLDEQRP
FLAIIFCRTKIRAGRLFDAMKARKYAAEELHGDLSQAKREKVMKLFREAKIQYLIATDVA
ARGLDVEGVTHVYNYDMPLDAETYIHRIGRTGRAGDEGVAVTFAAPKDMDDLHTIEKGIA
LKLPRQKIEIPSSEYTSQPKNKDQVYRPEKAKRGSQSNRGKVPRRPR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacgttttcagcattaggaatttccgatagattaaataaagcactaaagcaccaaggt
atttcaagccctactcaaattcaggagaaagcaattcctgctgtccttaaaggtgaggat
attatagcgaaagcccagacaggaacgggaaagacgcttgcatttgttttgccgattctt
gaaaaaatcaacacggaggataaagaagtccaggcgctgattattactccgaccagagag
cttgccatccaaatcacggcagaaataaagaagattacagacagactgaatgaggcagga
gttcttgccatttatggaggccaggatgtggagcgtcagattaaaaaactgggtcgcggc
attcacattgctgtagggacaccgggacgcatcctggatcacataaggagggagacaatt
gatctttcaaaagtatccactcttgtccttgatgaagctgatcaaatgcttcaggcaggc
ttccagaaagatattgaagaaattatagcccaaaccttcgattccagacagacactgctg
ttttcagcaacaatcacaaataaagtcagagacttgtccaggcaatatatgacaaatccc
aaagatattacagttcaggaaaagcagattactgttgaaaaaattacacagcttgtagtt
gaaacgaacgacagggctaagcaggcggctctttttcgctttttagacgagcagcgtccc
ttccttgcgattatcttttgcaggacaaaaataagggcaggcagactgtttgatgcaatg
aaggctcggaagtatgcagcagaagagctccacggcgatttatcacaggcaaaaagagaa
aaggtaatgaaactatttcgcgaagccaaaattcaatatttgattgccacagacgtagca
gcacgaggactagatgtagaaggggtgacccatgtctataactatgatatgcctctcgat
gcagaaacatatattcaccggattggaagaacgggaagagccggtgatgaaggagtggct
gtaacatttgccgcgccaaaagatatggacgacctccataccattgaaaaggggattgcg
ctaaagcttccgagacaaaagattgaaattccctcttccgaatacacatctcagcccaaa
aacaaagatcaggtttaccgtcctgaaaaagcaaaaagaggatcacaatccaatcgcgga
aaagtaccaagaaggccaaggtaa
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