KEGG   Methylomonas sp. DH-1: AYM39_00115
Entry
AYM39_00115       CDS       T04396                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mdh  Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:mdh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mdh02048]
    AYM39_00115
Enzymes [BR:mdh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AYM39_00115
Prokaryotic defense system [BR:mdh02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AYM39_00115
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C HSDR_N_2 SNF2-rel_dom SpecificRecomb
Other DBs
NCBI-ProteinID: ANE53736
UniProt: A0A172U367
LinkDB
Position
complement(23495..26827)
AA seq 1110 aa
MGCELETTEKPFVAQLQALGWQHIEGSIDDPSVTGRTGFAEVIQESLLREQLRALNPGPD
GLPWLDEARLQEAVAAITRLGTHKLMEANEKATALLIRGLTVEGLPGWDGGRGQTIRYID
WDTPANNRFTVINQYRVDCPPGFNSAKQFIVPDLVLLVNGIPLVVVECKSPSIPEPLAEA
VDQLRRYSNQRKAAFEVDENEGNEPLFATNQLLVATSFDEARVGCIGAAFEHYAQWKTVV
GPDGTGSELEVAHGLGKSALSEQERLIAGLLTPAHLLDVVQNFMLFMQAGGQTIKTVCRY
QQYRAVNRALVRLKTGLTRRQHGEHDQRGGIIWHTQGSGKSLTMVFLVRKMRADAQLRRF
KVIVITDRKDLQSQLSVTATLTGEVVDVAESTSGIKTLARRKGPGLIFATIQKYRDSDIA
GDAPLTADDLPKVEQTKAGYKAEEKFEVLNEDDSILVLVDEAHRTQAGDLHANLLAGLPN
CARIGFTGTPIIMGEKKRTHEIFGEFIDRYTIKEAEADGATVPVLYEGRTANGAIKDGAS
LDELFEDLFRQHTPEELEAIKQKYATKSHIFDAPTLIADKARDIIRHYVTNILPNGYKAQ
VVAYSRLAAIRYFEALQQARDELLAEAQALSPEDKALDDEALCQRPAKVQAVVQAWRYRD
TLARIEFAPVISGSNNDDPAWKRWTDGTAHEQLLKRFKKPLLLSDGKGAKPEKTDPLAFL
VVKSMLLTGFDAPIEGVMYLDRPIREAELLQAIARVNRTGFGKRCGIVVDYYGVAQHLKE
ALAAYADEDVAGALASLKDEVPVLRDRHLRVVDLFRRHGIESLDDAEACVEALGSEKLRA
EFAVKLKAFLASLDTVLPRPEGLPYSGDAKRLAYIYARARNRYKDTPVLGKDIGAKVRKL
IDDHVISLGIDPKIPPIQLSDAEFDSHVARAANDRAKASEMEHAIRSHISKHTDEDPVLY
RKLSERLNDILKNLGEQWNEVIAQLQKIIDELRTGRAGTADAPSDLPEHCAPFLRTVLDV
VSAGQTPTATELLRLKDVTVELVDLLVQELQSNRDIWSPHKRAAQEDLNTQLFEHLMRLR
PPLVDTDKAGVLADKLMEQARANHDKLVQV
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgggctgcgagcttgagacgacagaaaaaccattcgtagcccagctacaggcgctgggt
tggcagcacattgaaggcagcattgatgacccgtcggtcacgggccgcaccggctttgcc
gaggtgattcaggagagtttgctgcgcgaacaattgcgcgcgctgaatcccgggcctgac
ggtttgccctggctggacgaggcgcggctgcaagaagccgtcgccgccatcacccggctg
ggcacgcacaagctgatggaggccaacgaaaaggccaccgctttattgatccgtggcctg
accgttgaaggcctgcccggctgggacggtggccgcggccagaccatccgctacatcgac
tgggacaccccggctaacaaccgcttcacggtgattaaccaataccgcgtcgattgcccg
cccggcttcaacagcgccaagcagttcatcgtgcccgatctggtgctgctggtaaacggc
atcccgctggtggtggtggagtgcaaaagcccatccatccccgagccgctggccgaggcg
gtggatcagctccggcgctatagcaaccagcgcaaggcggccttcgaggtggatgaaaac
gaaggcaacgagcctctgttcgccaccaaccagttgctggtggccaccagtttcgacgag
gcaagggtaggctgcatcggcgcggccttcgagcattacgcccaatggaagacggtggtc
ggcccggatggcacgggttcggaactcgaggtggctcacggtttgggtaagtccgctctc
tcagagcaggagcgtttgattgccgggctgttgacacccgcccatctgctcgatgtggta
cagaatttcatgttgtttatgcaggcgggcgggcaaaccatcaagacggtgtgccgctat
cagcaataccgggccgtcaaccgcgccttggttcgactcaagaccggcctgacgcgacga
caacatggcgagcacgaccagcgcggcggcatcatttggcacacccaaggctccggtaaa
tcgctcaccatggtgtttctggtgcgcaagatgcgggcggatgcgcagttgcggcgcttc
aaggtgatcgtcatcaccgaccgtaaggacttacagagccagttatccgtgaccgccacg
ctgaccggcgaagtggtggacgtggctgagagtacgtcgggcatcaagacgctggcacga
cgcaaggggcctggactcatttttgctacgatccagaaataccgtgactccgacattgcg
ggcgatgcgccactgacagcagacgatctgccaaaagtagaacaaacgaaggctggttat
aaagccgaagaaaagttcgaagtgctcaatgaagatgacagcatcctggtgctggtcgac
gaagcccaccgcacccaggccggcgacctgcacgccaatctgctggcaggtctgcctaac
tgcgcgcgcatcggcttcaccggcacgccgatcatcatgggcgagaagaagcgcacccac
gagatcttcggcgagttcatcgaccgttacaccatcaaggaagccgaagccgacggcgcc
acggtgccggtgctgtacgagggccgcaccgccaatggcgcgatcaaggacggggccagc
ctggacgagttattcgaggatttgtttcgccagcacacgcctgaggaactggaggcgatc
aagcaaaagtacgccaccaagagccacatcttcgacgccccgacgctgatcgccgataag
gcgcgcgacatcattcgccactacgtcaccaacatcctgcccaatggttataaggcgcag
gtggtggcttacagccgcctggcggcaatccgctacttcgaggccttacagcaggcacgt
gacgagcttctggctgaagcgcaggcactttcccccgaagacaaggcgctggatgatgaa
gcgctgtgccaacgtccggccaaggtgcaggcggtggtgcaggcttggcgctaccgcgac
acgctggcccgcatcgaattcgcccccgtcatttccggcagcaacaatgacgacccggcc
tggaagcggtggaccgacggcacggcgcacgagcaattgctcaaacgcttcaagaagcct
ctgctgctgagtgatggcaagggagccaagccggagaaaaccgacccattggcctttttg
gtcgtgaagtcgatgttgctgaccggcttcgacgcgcccatcgaaggcgtgatgtatctg
gaccggcccatccgcgaggcggaattgctgcaggccattgcccgcgtcaaccgtaccggc
tttggcaagcggtgcggcatcgtggtggactattacggcgtggcgcagcatttgaaggag
gcgctggcggcttatgctgatgaagacgtagcaggtgcactggccagcctaaaggacgaa
gtgccggtactgcgcgaccggcatctgcgcgtggtggacctgtttcgtcggcatggcatt
gaatcgctcgatgacgccgaagcctgtgtcgaggctttgggcagcgagaagttgcgcgcc
gagttcgcggtcaaactcaaagcctttctggcatcgttggataccgtgctgccgcgccct
gaaggcttgccgtattctggcgacgccaagcgtctggcttacatctatgcgcgtgcccga
aatcgttacaaggacacgccggtattgggcaaggatattggcgccaaggtacgcaagctg
atcgacgaccacgtgatttcgctgggcatcgatccaaaaattccgccgattcagctaagt
gatgcggagtttgatagccacgtggcgcgtgccgccaacgaccgcgccaaggcttccgaa
atggagcacgcgattcgctcgcatattagcaagcacaccgacgaagacccggtgctgtac
cgcaaactctcggaacgcttgaacgatatcctgaaaaacttaggcgaacagtggaatgag
gtcattgcgcaactgcagaaaatcatcgacgagctgcgcaccggtagggcgggaactgcc
gatgcccccagcgacttgcccgagcattgtgcgccgtttttgcgtaccgtcctggatgtg
gtttctgctggtcaaacaccaacggcaactgagttactgcgcctgaaggatgtgaccgtg
gagttggtggacctgctggtgcaggaacttcaaagtaaccgggatatctggagccctcac
aaacgcgcagcacaagaagacctgaacacccaactgttcgaacacttgatgcggctgaga
ccgcctttggtggataccgataaggcaggtgtgctggccgacaagctgatggagcaggcg
cgcgccaatcacgacaagctggtgcaggtgtag

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