Methylomonas sp. DH-1: AYM39_01925
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Entry
AYM39_01925 CDS
T04396
Name
(GenBank) diguanylate cyclase
Organism
mdh
Methylomonas sp. DH-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
PAS_9
PAS_4
PAS
MASE1
PAS_3
PAS_8
PAS_13
GGA_N-GAT
Motif
Other DBs
NCBI-ProteinID:
ANE54064
UniProt:
A0A172U4K2
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Position
438219..442364
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AA seq
1381 aa
AA seq
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MPASLNLLRSANLAAPALRARQAGFMRPWHFAGGIGLLAAAIFLGGWLGMKLVIPPGYSS
PLWPPAGIALAALLIFGRRFWPGIWLGALLNELATAASFSGQLDLAAIAAASLIASGSTL
QAVVASVLSEKYLQPGLPKLETPGAILAFFVLAGPLACLTAPSVGVATLYGLDLMPGDEL
QNSWRNWWIGDSLGVMVIAPLLFCVCGRPQALWRARRLSVALPLLGTLLALVLVFMQVFR
AEQTRIQQAFDNRAAAIETLLVEYTTHVVDSSLALRDVFLASSDVSRAEFAVFARGILER
HPEIQALEWLPRIRLEQRAAFEAKVQQEGYAGFRITERGADGGLAPAAERAEYFPVAYVE
PMVGNEKAFGLDSLSNPLSKLAKDEARATGKPTASAGLSLMQVNGSAPGVLVSIPVFKAA
AGVSGQDFAGFVSAVILPARMVEVVTKGLNTQSLDISIEDTAGSGVHKELFAKRLPATVR
QNYALRDWQRIFKFVDRDWRVTISPSSLFINEQGSSVLWVTLLGGLCFTSLMNIMLLIVS
GRTAAVEALVEQRTRDLETAVAEQKAAAQQAQESELKLRTIVESQPECVKLLARDGSLLQ
MNRAGLDMIEADSLQQAQDCRLEYLVGAKYRSQFKKLIRRVFAGASGTLEFEITGLRGGQ
RWLDTHAVPMRDADGNITALLGLSRDITERKLAEDDLKLAARVFSAAHEGILITDAAANI
IDVNPTFCEITGYSRDEIVGKNPSILQSGKYGPEFYAEMWRELRQHQHWHGELWNRKKNG
DLYAEWLTISALCDSDGHITHYVGLFSDVTQAKQQQQLLELVAHYDPLTRLPNRILFADR
LSQAIAHSKRDKSLLAICFLDLDGFKPVNDVFGHDVGDRVLVEVAERIKNAIREEDSVSR
HGGDEFALLLRDIDTLEQCEQAILRIHQAISEPFAIDGQQVTVGASSGYTLYPLDDADPD
GLLRHADHAMYQAKLAGKNRCQLFDATQDQQIMHRHQQLRDIEAAFLNGEMCLYYQPKVD
IKRGRVAGVEALIRWLSPQRGMVPPLDFLPAIASTDLEIRIGNWVIEQACRDLAAWRAQG
LKLEVSVNISSYHLLWPGIQDHIAGILRQHPEVPAQALQLEILESTALDDLGAVNRIIKN
CREQLGISVALDDFGTGYSSLTHLRHLSVDTVKIDQTFVRDMLDDPDDYAIIDSVIELSQ
AFNRKVVAEGVESQEQGVVLLLLGCRLLQGYAIARPMPAAQVAEWVAGYRPFADWNFYAN
AELTPEQTMIAIRRCDARQWLQRVRDCLYGAGQKPAPAWPIMDRKRTHLGRWLRQAKQER
QYAEDWLERLQQLQHDLHSQADRLKHRYDAGELAAAQAGFADLQALQQEIDERLILYTQL
P
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttccctgaatcttttacgttccgccaatctggccgccccggcgctgcgggca
cggcaagccggatttatgcggccatggcatttcgccggcggcatcggtttgctggcggcc
gcgatttttctcggcggttggttggggatgaaactggtgattccgcccggttattccagc
ccgctatggccgccggccgggattgcattggccgcgctgctgatattcggccgccggttc
tggcccggcatctggttgggggcgctgctgaacgaactggccacggctgcgagtttctcc
ggccaattggacttggccgctattgccgccgcgtcgctgatcgccagcggcagtaccctg
caagccgtggtcgcgtccgtgttgtccgaaaaatacctgcagcctggcttgccgaagctg
gagacgccgggcgccatcctggcatttttcgtgttggccggcccgctggcctgtttgacc
gcacccagcgttggtgtcgccaccctgtacggcctggatttgatgcccggcgacgagttg
caaaactcctggcgaaactggtggatcggcgacagcttgggggtgatggtgatcgcgccg
ttgctattttgcgtctgcggccggccgcaggcgttgtggcgggcgcggcgcttgagcgtg
gccttgccgctgctgggaactttgctggcgctggttttagtgttcatgcaggtgtttcgc
gccgagcaaacccggatccagcaggccttcgacaatcgggccgccgccatcgaaacgcta
ttggtggaatataccacccatgtcgtcgacagcagtctggcgttgcgggatgtgtttctg
gcgtccagcgatgtcagccgcgcggaatttgccgtgttcgcccgcggcattttggaacgg
catccggaaatccaggccttggaatggttgccgcgcatccgcctcgagcaacgcgcagcc
ttcgaggccaaagtgcagcaggaaggctacgccggctttcgcattaccgagcgcggcgcc
gacggcggtttggcgccggccgccgaacgcgccgaatattttccggtggcctacgtcgag
ccgatggtcggcaacgaaaaagcgttcggcctggattcgctttccaatccgctgagcaaa
ctggccaaggacgaggcccgcgccaccggcaagccgaccgcgtcggccggcctcagtctg
atgcaggtcaacggctcggcgccgggcgtattggtgtcgataccggtgttcaaggcggcg
gccggcgttagcggccaggattttgccggtttcgtatcggcggtgattttgccggcgcgg
atggtggaagtcgttaccaagggactgaacacgcaatcgctggacatcagtatcgaagat
accgccggcagcggcgtgcataaggaactgtttgccaagcgtctgccggccacggtaagg
caaaattacgcgctgcgggattggcagcgcatcttcaagttcgtcgaccgcgattggcgg
gtgacgatctcgccgagtagcctgttcatcaacgaacagggttcttccgtgctgtgggtg
accttgctcggcgggctttgtttcaccagcttgatgaacattatgctgttgatcgtcagc
ggccgtaccgccgcagtcgaagctttggtcgaacagcgtacccgcgatctggaaacggcg
gtggccgaacaaaaagccgcggcgcaacaggcgcaggagtcggagctgaaattgcgcact
atcgtcgaatcgcaaccggaatgcgtaaaactgctggcgcgcgacggcagcctgctgcag
atgaaccgggccggcctggacatgatagaagccgatagcttgcaacaggcccaggattgc
cggttggaatatctggttggcgccaaataccgtagccaattcaagaaattgatccgccgc
gtcttcgccggggcttccggcacgctggaattcgaaatcaccggtttacgcggcggccag
cgctggctggatacccatgccgtgccgatgcgcgatgccgacggcaatattaccgccttg
ctcggcctgtcgcgcgacattaccgagcgcaaattggccgaggatgatttgaaactggcc
gcccgcgtattcagcgcagcccacgagggcattttgatcaccgacgccgccgccaacatc
atcgacgtcaatccgacgttttgcgagattaccggatacagccgggacgagatcgtcggc
aaaaatccaagcattctgcaatccggcaaatacggcccggaattctatgccgagatgtgg
cgcgagttgcgccagcaccagcattggcacggcgaattgtggaaccgcaagaaaaacggc
gatttatatgcggaatggttgacgatttcggcgttgtgcgacagcgacggccacatcacg
cattacgttggcttgttttccgacgtgacccaggccaaacaacagcaacagcttttggag
ttggtggcgcattacgacccgctgacccgcttgccgaaccggatattgttcgccgaccgt
ctgagccaggctatcgcccacagcaagcgggacaagtcgctgctggcgatctgctttctg
gatctggacggtttcaaaccggtcaacgacgtgttcggccacgacgtcggcgaccgggtg
ctggtggaagtggcggagcgcatcaaaaatgccatacgcgaggaagacagcgtgtcgcgc
cacggcggcgacgaatttgcgttgctgctgcgcgatatcgacacgctggagcaatgcgag
caggccattctgcgcattcaccaggcgatttccgaaccgttcgccatcgacggccagcaa
gtcacggtcggcgccagcagcggctataccttatatccgctggacgatgccgatccggac
ggcctgttgcgtcacgccgaccacgccatgtaccaggccaaattggccggcaagaaccgc
tgccagttgttcgatgcgacccaggaccagcagatcatgcatcgccaccagcaattgcgc
gatatcgaagcggccttcctcaacggcgaaatgtgcctgtattaccagcccaaagtcgat
atcaagcgcggacgggtggccggggtcgaggcgctgatccgttggttgagcccgcaacgc
ggcatggtgccgccgctggattttttgccggccatcgcctccaccgatctggaaatccgc
atcggcaattgggtgatcgagcaggcctgtcgcgacctggcggcctggcgggcgcagggg
ttgaagttggaagtcagcgtcaatatttcctcttaccacttgctgtggcccgggattcag
gaccatatcgccggcatcttgcggcaacatcccgaggttccggcgcaagccttgcagctc
gaaatactggaaagcacggcgttggacgatttgggcgccgtgaaccgcatcatcaagaat
tgccgggaacaactcggcatcagcgtggcgctggacgacttcggcaccggctattcgtcg
ttgactcatttgcggcatttatcggtcgataccgtcaaaatcgatcagaccttcgttcgc
gacatgctggacgacccggacgattacgccattatcgacagcgtgatcgagctgagccag
gcttttaaccgtaaggtggttgccgaaggcgtcgaaagccaggagcagggcgtcgtgctg
ttgttgctgggctgccggctgctgcaaggttacgccattgccaggccgatgccggccgcc
caggtcgccgaatgggtcgccggctaccggccttttgccgactggaatttctatgccaat
gccgagttgacgccggaacagaccatgatcgcgattcggcgctgcgatgcccggcaatgg
ttgcagcgggtgcgggattgcctgtacggtgccgggcagaagccggcgccggcctggccg
atcatggatcgcaaacgcacccatctcgggcgctggctgcgccaggccaagcaggagcgg
caatacgccgaggattggctggaacggctccagcaattgcagcacgatttgcacagccaa
gccgaccgcttgaagcatcggtacgatgccggcgagttggcggcagcgcaagccgggttt
gccgatttgcaggcgctacaacaggaaatcgacgaacgtctgatcctgtatactcaactt
ccctga
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