Methylomonas sp. DH-1: AYM39_02965
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Entry
AYM39_02965 CDS
T04396
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00300
Lysine biosynthesis
mdh01100
Metabolic pathways
mdh01120
Microbial metabolism in diverse environments
mdh01230
Biosynthesis of amino acids
Module
mdh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYM39_02965
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdh01002
]
AYM39_02965
Enzymes [BR:
mdh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AYM39_02965
Peptidases and inhibitors [BR:
mdh01002
]
Metallo peptidases
Family M20
AYM39_02965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
DUF7585
Motif
Other DBs
NCBI-ProteinID:
ANE54247
UniProt:
A0A172U5K5
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All DBs
Position
648373..649500
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AA seq
375 aa
AA seq
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MTETLSLLEELIRRESVTPNDAGCQDLLAERLGKLGFNDERLNFADTQNLWLRRGSEPPL
FVFLGHTDVVPTGPLAAWDSPPFEPTLRDGKLYGRGAADMKGGIAAFVTAVERFIAQYPQ
HKGSIAVMMTSDEEGAATHGVVKVVEVLEGRNEKIDWCLVGEPSSDKTVGDVIRVGRRGS
LCAKLTVFGIQGHVAYPELAENPIHTFAPALKDLTEEVWDHGNRFFPPTRLQVSNINAGT
GAENIIPGQAEVQFNLRFCTELDEATIKARTQAILDKYGFKYDLQWRLSGNPFLTARGEL
VDATHAAIETVCGFQTQDDTGGGTSDGRFVAPTGAQVIELGPLNASIHKVNEHIGLDDLE
TLSRIYQQILVNLLA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgctttccttgctggaagagctgattcggcgcgaatcggtcactcccaac
gacgccggctgccaggatttgctggccgaacgcctcggcaaactcggcttcaacgacgaa
cgcctgaacttcgccgatacccaaaacctgtggctgcgccgcggcagcgaaccgccgcta
ttcgtatttttgggccataccgacgtggtgccgaccggaccgctggcggcctgggattcg
ccgccgttcgagccgacgttgcgcgacggcaaactctacggccgcggtgcggccgacatg
aaaggcggtatcgccgcattcgtgactgcggtggagcgctttatcgcccagtatccgcag
cataaaggttcgatcgcggtgatgatgaccagcgacgaagagggcgcggcgactcacggc
gtcgtcaaagtggttgaagtattggaaggccgcaacgaaaagatcgattggtgcttggtc
ggcgagccttccagcgataaaaccgtcggcgacgtgatccgcgtcggccgccgcggatcg
ctgtgcgccaaactgaccgtattcggtattcaaggccatgtggcttatccggagttggcg
gaaaacccgatccatactttcgcgccggctttgaaggatttgaccgaagaagtctgggat
cacggcaaccggttctttccacctacccggctgcaggtgtcgaatatcaatgccggtacc
ggtgccgaaaacatcattcccggccaagccgaggtgcagttcaatctgcgtttctgcacc
gaactcgacgaagccacgatcaaggcccggactcaggccatcttggacaaatacggattc
aaatacgacttgcaatggcggctgtcgggcaatccgtttttgacggcgcgcggcgaattg
gtcgacgccactcacgccgcgatcgaaacggtgtgtggctttcagacccaggacgatacc
ggcggcggcacctccgacggccgcttcgttgccccgaccggtgcccaggtcatcgaacta
gggccgttgaatgccagcattcataaagtcaacgaacatatcgggctggacgatttggaa
acgctgagccggatttaccagcagatactggtcaacttgctggcctaa
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