Methylomonas sp. DH-1: AYM39_03400
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Entry
AYM39_03400 CDS
T04396
Name
(GenBank) hypothetical protein
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYM39_03400
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdh01001
]
AYM39_03400
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mdh02022
]
AYM39_03400
Enzymes [BR:
mdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AYM39_03400
Protein kinases [BR:
mdh01001
]
Histidine kinases
Other
AYM39_03400
Two-component system [BR:
mdh02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
AYM39_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_3
PAS_9
PAS_8
HATPase_c
Response_reg
GAF_2
GAF
HisKA
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ANE54327
UniProt:
A0A172U5T3
LinkDB
All DBs
Position
complement(740738..744331)
Genome browser
AA seq
1197 aa
AA seq
DB search
MTHPVSALAPFHNFLDTLPDATLLIDRRHRILFANSEVETVFGYTPAELQAEDIDMLLPP
RFRDEHSHKRQKYLAEPSVRRMGSGLNLWGLHKSGREFPVEISLSPLQTEQEWLVVCSVR
DISHLKNAEQALINDERFRLFMAHAPSAIAMFDKEMRYLAVSRRWLEDFRLEQRDILGIS
HYELFPETSARWCDIYCRCLAGETLSAEEDTFVRADGRTDWVKWEMCPWYANDGTIGGVI
LFSEVVTARKEAEAKLRKSEDHFHKILDNAVAGIAITDLTGNFQYCNSAYCAITGYSLTE
LQGLEFRNLIHPDDLAANLAEVRRVVDGEVASFVIENRYIAKSGQPVWVRKYGSTLPGDP
IQLMVIAIDINQLKQVELDLQQSYRNLAASERLFRSLIESMPQMAWIAGNDGVIRYANSQ
WLAYLNCPNPQHPDDVWFAPVHPNDRQRVMLAWERAIREQTSFNLECRLLNCGNSYRWWQ
VRVAVLHKLTGTSDEWLGICTDIHDLKREEEALELLNTACFRLWQTNSLTDGLQEMLIAT
TGMLQADMGNIQLLSNEGDLKIMAQQGFRQDFLDYFHTMSEGTPTACGLALRTRERQVIA
DVDQDPFYAPFREVARQAGYRAVQSTPLMSNEGLPIGVISTHFRTPRFLDGLEASMLDIY
AQQAANFIKRCQAETKLRRSEEHFRSVFDNALVGISVRNRAGELLDCNAAYCALLGYSRE
ELQPMPLDKIMFAADIEAYLHNFRRLTAGMVRFFQMEIRYLCKSGRVLWVNQYVCILHKQ
NGEQETILTIVSDITPLKLSQAELRDSKQHLEAAVKTRTQELNGALITAEKANEFKTRFL
NAASHDLRQPLQSADLYLSVLAKRLESSDCKAVCDDLHESIAMMGSILDALLDIARLESG
IIVPSKRDFALRDLFDRLAATTVPQAALKGLLLEYRHGDCVVHSDPALLERIVGNLVANA
IKYTERGQIIVSCDCSSKARISVEDSGIGIPFDSLAHIFEAYYQVNNAERDRDKGLGLGL
AIVKHIADILGLQLSVSSQPGVGSVFSVELPLGTSPPPPAAATSAKPAVSNNNRSARILF
IDDDSAICKAVKMLFDAHGISGHFAQNGEAALAAIADGLRPSLIISDYQLPGLDGIETVD
RIRAAIGLELPALIVTGNTSLTKTLGKQLPNCKAFSKPLEPARLLELIATYLPAAQK
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccctgtttcggcactggcgcccttccataattttctcgatacattgccggat
gcgacgctgttaatcgataggcgacatcggattctgtttgccaatagcgaagtcgaaacc
gtgttcggctacaccccagccgaattgcaggcggaggatatcgatatgctgctgccgccc
cgcttccgcgacgagcacagccacaaacggcaaaagtacttggccgaaccgtcggtcagg
cgcatgggttccggattgaatctgtggggattacacaagtccggccgcgaatttccggtg
gaaatcagcttgagtccgctgcaaaccgagcaggaatggctggtcgtctgctcggtccgc
gacatcagccatctgaaaaacgccgagcaggcgctgatcaacgacgagcgcttccgtctg
ttcatggcgcatgcgccgtccgccatcgccatgttcgacaaagaaatgcgctacctggca
gtcagccgacgctggctggaggatttccggctggaacagcgcgacatcctcggcattagc
cattacgagctatttccggagacatccgcgcgctggtgcgatatctactgccgttgtctg
gccggcgagaccttgtccgcagaagaagatacttttgtccgcgccgacgggcggacggat
tgggtgaaatgggaaatgtgcccttggtacgccaacgacggcactatcggcggcgtgatt
ttgttcagcgaagtcgtcacggcacgcaaggaagccgaagccaaactgcgtaaaagcgag
gaccatttccacaaaatcttagacaacgccgtcgccggcatcgccatcaccgatctgacc
ggtaattttcaatattgcaatagcgcttattgcgccatcaccggttattcgctaaccgaa
ctgcaaggtctcgaattccggaacttgatccatcccgatgatttagcggccaatctggcc
gaagtccggcgagtagtggacggcgaagtcgcctcgttcgtcatcgaaaaccgttatatc
gccaagagcggccaaccggtctgggtacgcaagtacggctccacgctgccgggcgacccg
atacagttgatggtgatcgcgatcgacatcaaccagctcaaacaagtcgaattggacttg
cagcagagctaccgtaacttggccgccagcgaacggctgttccgcagcctgatcgaatcc
atgccgcagatggcctggattgccggcaacgacggcgtcatccgctatgccaatagccaa
tggctggcgtacctgaattgcccgaacccgcagcatccggacgacgtctggtttgccccg
gtccaccccaacgaccgccagcgggtgatgctggcctgggagcgggccattcgcgaacaa
acttcgtttaacctggaatgccgcttgctgaactgcggcaatagttatcgctggtggcaa
gttcgggtagccgtgctgcataaattgacgggcaccagcgatgaatggctgggcatctgc
accgacattcacgatctgaaacgggaagaggaggcattggaattgctgaacacggcctgt
tttcggctttggcagaccaatagcctgaccgacgggctgcaggaaatgctgatcgcaacc
acgggcatgctacaggccgacatgggtaacatccaattgctgagcaacgaaggcgattta
aagatcatggctcagcagggttttcgccaggatttcctggactatttccacacgatgtcc
gagggcacgccgacggcttgtggactggcactccgtacccgcgagcggcaagtgatcgcc
gacgttgaccaggacccgttttatgcaccgtttcgcgaggtcgcccgccaagccggttat
cgggccgtgcaaagtaccccgttaatgtccaacgaaggcctgccgatcggcgtgatttcc
acccatttccgaacgccgcggtttttggacggcttggaagccagcatgctcgatatctat
gcgcaacaggcggccaatttcatcaagcgctgtcaggccgaaaccaagctgcgccgaagc
gaagaacattttcgcagcgttttcgacaatgccttggtcggaatttcggttagaaaccgg
gccggcgaactgctggattgcaacgccgcatattgcgcgctactgggatacagtcgcgaa
gagttgcaaccgatgccgttggacaaaatcatgtttgctgccgatatcgaagcctacctg
cacaacttccggcgactgaccgctggcatggtgaggtttttccagatggaaatccgctac
ctgtgcaaatccggccgcgtgctttgggttaaccagtacgtttgtatcttgcacaaacaa
aacggcgagcaagagaccatactgaccattgtttcggacatcaccccgctcaagctcagc
caagcggaattgcgcgacagcaaacagcatctcgaggccgcggtgaaaacccggacccag
gaactcaatggcgcgctgattacggcggaaaaagccaacgaattcaagacccggtttttg
aatgcggccagccacgatttgcgccagccgctgcaatcggccgatttatacctgtcggtg
ctggcaaagcggctggagtcgtcggactgtaaggcggtgtgcgacgatttgcacgaatcg
atcgcgatgatgggttccatcctcgacgcgctgctcgacatcgcgcgcttggaaagcggg
attatcgtccccagcaaacgcgatttcgcgctgcgcgacttattcgaccggctcgccgcc
acgaccgtgccgcaggccgcgctcaaggggctcctattggaataccgccacggcgattgc
gtcgtacatagcgatccggccttgctggaacgcatcgtcggcaatttggtcgctaacgcc
atcaaatataccgagcgcggccaaatcatcgtctcctgcgactgcagcagcaaggcgcgc
atctcggtcgaagacagcggcatcggcattccgttcgacagcttggcccatatcttcgag
gcctattaccaagttaacaatgccgaacgggaccgggacaaaggcttggggctgggcctg
gcgatcgtcaagcatatcgccgatatcctcggcttgcagttatcggtaagttcgcagccg
ggcgtcggctcggtgttttccgtggaattgccattgggtacgtccccgccgccgcccgcc
gccgccacatcggcaaagccggccgtttctaataataaccgttcggcgcggatattgttc
atcgacgacgattcggcaatctgcaaagcggtgaaaatgctgttcgacgcccacggcatc
agcggacatttcgcccaaaacggcgaagcggcattggccgcgattgccgacggcttgcgg
ccaagcctgattatcagcgattaccagttgccggggctggacggcatcgaaactgtggac
cggattcgcgccgcgatcggcctcgagttaccggcgctgatcgttaccggcaataccagt
ttgactaaaaccctgggcaaacagctcccgaattgcaaagcattctccaagccgctggag
ccggcacgcttgttggaattgatcgcgacctacttgcccgccgctcagaaataa
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