Methylomonas sp. DH-1: AYM39_03870
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Entry
AYM39_03870 CDS
T04396
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_03870
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYM39_03870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
SLFN-g3_helicase
GvpD_P-loop
Lon_C
RecA
Rad51
AAA
AAA_22
AAA_16
AAA_14
nSTAND3
Elong_Iki1
divDNAB
DUF7125
AAA_24
AAA_30
Zeta_toxin
AAA_19
PAXNEB
NB-ARC
AAA_28
nSTAND1
ABC_tran
AAA_33
AAA_29
AAA_17
NTPase_1
DEAD
KTI12
TK
DZR
GvpD_bR2
Viral_helicase1
DAP3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ANE54411
UniProt:
A0A172U4X0
LinkDB
All DBs
Position
847732..849099
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AA seq
455 aa
AA seq
DB search
MAKKTKSAFVCTECGADFAGWAGQCNQCGAWNTIKEVKLGGGKTERERSGYAGSRSAVQL
LSEVNLAQAERISTGLAEFDRVLGGGIVKGSVVLIGGAPGAGKSTILLQAVAHIARQLPV
LYVSGEESLQQIAERAHRLQLNSAGIKMLAETSVQQICQVLDEEQPQVVIIDSIQVMYTA
DSDSAPGSVSQVRESASYLTQYAKRTGVSFFMVGHVTKDQSLAGPMTLSHIVDAQVVLSS
TDDARFRVLRADKNRFGSVGELGFFAMESSGLKEVKNPSAMFLSRAEKPAPGSVVTVLWE
GTRPLLVEIQALVTESQYGNPRRLAVGLDQNRLAMLLAVLSRHGGIFTGNDEIYANVVGG
IKVSETSTDLAILVGVVSSLRDRIVPYDAVFFGEVGLNGEIRPVANGHARLNEAAKHGFK
KAIIPKSNKPKDGVKNLEIHAVGNIQEALAVVNEL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaaccaaatccgctttcgtctgcaccgagtgcggtgccgattttgccggc
tgggccggccagtgcaaccagtgcggagcctggaacacgatcaaggaagtcaaactcggc
ggcggcaaaacggagcgcgagcgttcgggctacgccggcagccgcagtgcggtgcaattg
ttgtccgaagtcaatctggctcaggccgaacggatttccaccggtctagccgagttcgac
cgcgtgctcggcggcggcatcgtcaagggcagcgtggtgttgatcggcggcgcgcctggg
gccggcaagagtacgattttgctgcaagccgtcgcccatatcgcccggcaactgccggtg
ctgtacgtgtcgggcgaggagtcgttgcaacagatcgccgaacgcgcccatcggttgcag
ctcaacagcgccggcatcaagatgttggccgaaacctcggtgcagcagatttgccaggtg
ttggacgaagagcagccgcaggttgtcatcatcgattcgattcaggtcatgtacacggcg
gattccgactcggcgccgggctcggtgtcgcaggtgcgggagtcggccagttatttgacc
caatacgccaagcgcactggcgtatcgttctttatggtcggccacgtcaccaaggaccag
tcgttggccgggccgatgaccttgagccatatcgtcgacgcccaggtggtgctgtcttcg
accgacgatgcgcggtttcgggtgctgcgggccgacaagaaccgtttcggcagcgtcggc
gagctgggtttttttgcgatggaaagcagcggcttgaaggaagtgaaaaacccgtcggca
atgtttttgtcgcgggcggaaaaaccggcgccgggcagcgtggtgacggtgttatgggaa
ggcacccgaccgctattggtggagatccaggcgttggtcacggaaagccagtacggcaat
ccgcgccggctggcggtgggtctggaccaaaaccgtttggcgatgttgctggcggtgttg
tcgcgccacggtggcattttcaccggcaacgacgagatttacgccaatgtggtcggcggc
atcaaggtcagcgagaccagcaccgatttggcgatcttggttggcgtggtgtccagtttg
cgcgaccgcatcgtgccttacgatgcggtgtttttcggcgaagtgggtttgaacggcgaa
atccgcccggtcgccaacggccatgcccgcctcaacgaagccgccaaacacggctttaaa
aaagccatcattccgaaaagcaacaaacccaaggacggcgtcaaaaatctggaaattcac
gcggtgggtaatattcaggaagcgttggcggtggtcaacgaactgtag
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