KEGG   Methylomonas sp. DH-1: AYM39_03870
Entry
AYM39_03870       CDS       T04396                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
mdh  Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:mdh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdh03400]
    AYM39_03870
DNA repair and recombination proteins [BR:mdh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AYM39_03870
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB DnaB_C ChlI SLFN-g3_helicase GvpD_P-loop Lon_C RecA Rad51 AAA AAA_22 AAA_16 AAA_14 nSTAND3 Elong_Iki1 divDNAB DUF7125 AAA_24 AAA_30 Zeta_toxin AAA_19 PAXNEB NB-ARC AAA_28 nSTAND1 ABC_tran AAA_33 AAA_29 AAA_17 NTPase_1 DEAD KTI12 TK DZR GvpD_bR2 Viral_helicase1 DAP3 AAA_18
Other DBs
NCBI-ProteinID: ANE54411
UniProt: A0A172U4X0
LinkDB
Position
847732..849099
AA seq 455 aa
MAKKTKSAFVCTECGADFAGWAGQCNQCGAWNTIKEVKLGGGKTERERSGYAGSRSAVQL
LSEVNLAQAERISTGLAEFDRVLGGGIVKGSVVLIGGAPGAGKSTILLQAVAHIARQLPV
LYVSGEESLQQIAERAHRLQLNSAGIKMLAETSVQQICQVLDEEQPQVVIIDSIQVMYTA
DSDSAPGSVSQVRESASYLTQYAKRTGVSFFMVGHVTKDQSLAGPMTLSHIVDAQVVLSS
TDDARFRVLRADKNRFGSVGELGFFAMESSGLKEVKNPSAMFLSRAEKPAPGSVVTVLWE
GTRPLLVEIQALVTESQYGNPRRLAVGLDQNRLAMLLAVLSRHGGIFTGNDEIYANVVGG
IKVSETSTDLAILVGVVSSLRDRIVPYDAVFFGEVGLNGEIRPVANGHARLNEAAKHGFK
KAIIPKSNKPKDGVKNLEIHAVGNIQEALAVVNEL
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggctaaaaaaaccaaatccgctttcgtctgcaccgagtgcggtgccgattttgccggc
tgggccggccagtgcaaccagtgcggagcctggaacacgatcaaggaagtcaaactcggc
ggcggcaaaacggagcgcgagcgttcgggctacgccggcagccgcagtgcggtgcaattg
ttgtccgaagtcaatctggctcaggccgaacggatttccaccggtctagccgagttcgac
cgcgtgctcggcggcggcatcgtcaagggcagcgtggtgttgatcggcggcgcgcctggg
gccggcaagagtacgattttgctgcaagccgtcgcccatatcgcccggcaactgccggtg
ctgtacgtgtcgggcgaggagtcgttgcaacagatcgccgaacgcgcccatcggttgcag
ctcaacagcgccggcatcaagatgttggccgaaacctcggtgcagcagatttgccaggtg
ttggacgaagagcagccgcaggttgtcatcatcgattcgattcaggtcatgtacacggcg
gattccgactcggcgccgggctcggtgtcgcaggtgcgggagtcggccagttatttgacc
caatacgccaagcgcactggcgtatcgttctttatggtcggccacgtcaccaaggaccag
tcgttggccgggccgatgaccttgagccatatcgtcgacgcccaggtggtgctgtcttcg
accgacgatgcgcggtttcgggtgctgcgggccgacaagaaccgtttcggcagcgtcggc
gagctgggtttttttgcgatggaaagcagcggcttgaaggaagtgaaaaacccgtcggca
atgtttttgtcgcgggcggaaaaaccggcgccgggcagcgtggtgacggtgttatgggaa
ggcacccgaccgctattggtggagatccaggcgttggtcacggaaagccagtacggcaat
ccgcgccggctggcggtgggtctggaccaaaaccgtttggcgatgttgctggcggtgttg
tcgcgccacggtggcattttcaccggcaacgacgagatttacgccaatgtggtcggcggc
atcaaggtcagcgagaccagcaccgatttggcgatcttggttggcgtggtgtccagtttg
cgcgaccgcatcgtgccttacgatgcggtgtttttcggcgaagtgggtttgaacggcgaa
atccgcccggtcgccaacggccatgcccgcctcaacgaagccgccaaacacggctttaaa
aaagccatcattccgaaaagcaacaaacccaaggacggcgtcaaaaatctggaaattcac
gcggtgggtaatattcaggaagcgttggcggtggtcaacgaactgtag

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