Methylomonas sp. DH-1: AYM39_04465
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Entry
AYM39_04465 CDS
T04396
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00900
Terpenoid backbone biosynthesis
mdh01100
Metabolic pathways
mdh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AYM39_04465 (ispF)
Enzymes [BR:
mdh01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
AYM39_04465 (ispF)
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Motif
Pfam:
YgbB
NPCBM
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
ANE54511
UniProt:
A0A172U560
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All DBs
Position
947141..947614
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AA seq
157 aa
AA seq
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MIRVGMGYDVHRFNDGDHIILGGVTIPYEKGLEAHSDGDVVLHALADAILGAAALGDIGK
HFPDTDPNFKGADSRVLLRHVYNIVKEKGYKLVNADVTIIAQAPKMLPHVPAMRANIAAD
LEVDVDCINVKATTTEKLGFEGRKEGIAVQAVVLIEK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgattcgagtcggcatgggctacgacgtccaccgcttcaacgacggcgaccacatcatt
ttgggcggcgtcaccatcccctacgaaaaaggcctggaagcccattccgacggtgacgtg
gtgttgcacgcgctggccgacgcaatactcggcgcggcagcgttgggcgacatcggcaaa
cacttcccggataccgatcccaacttcaagggtgccgacagccgggtgctgctgcgccac
gtctacaatatcgtcaaagaaaaaggctataagctggtcaacgccgacgtcaccatcatc
gcccaggccccaaaaatgctgccgcacgtgccggccatgcgcgccaacatcgccgccgac
ctggaagtggatgtcgactgcatcaacgtcaaagccaccaccaccgagaaactcggcttc
gaaggccgcaaggaaggcatcgcggtgcaggcggtggtgttgatcgaaaagtga
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