Methylomonas sp. DH-1: AYM39_04475
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Entry
AYM39_04475 CDS
T04396
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AYM39_04475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdh02000
]
AYM39_04475
02044 Secretion system [BR:
mdh02044
]
AYM39_04475
Transporters [BR:
mdh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
AYM39_04475
Secretion system [BR:
mdh02044
]
Type I secretion system
Adhesin protein transporter
AYM39_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ANE54513
UniProt:
A0A172U621
LinkDB
All DBs
Position
948772..950922
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AA seq
716 aa
AA seq
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MPDSLLSLGPANPKFDDPLLLALLSVCKILHIPQTATALVAGLPLPEHKLTPDLFPRAAE
RAGLRASLLRRPLERISTLVLPVVLLLKDGTTCVLVGRDGERCTVILPETESGEKTVAAA
ELNALYSGLAFFVQVSHHFDARSGDAGLPKAKHWFWDVIAKSWPIYAEVLAASLLINIFA
LAAPLFFMNVYDRVVPNRALETLWVFALGIVIVFGFELAMKLLRSYFIDAAGKRADIVLS
ATIFEKLMNIRMEAKPVSVGGFANNLSEFESFREFLTSASLATLIDLPFLILFILIIYSI
GGHLAWIPLGILPLAVLVGIALQAPLRATIQALFKAGAEKNATLVEALSNLETLKAAGAE
GQLQARWEKGIGEMARLGLKSRFYSGLTVNLTAFFQQLASVFVVVAGVYRIADGDLTTGG
LVACTMLTSRALAPVGQVAALLTRYHHARAALDSLNRMMALPVEREPGRDYLHRPRFNGD
IEFKHVAFHYPQQPVKALEGISFKIKAGERVGVIGRIGSGKSTLERLILGLYQAQQGSIL
IDGADIRQIDPADLRSQIGYVPQDISLMYGSVKDNIALGSGFVDDSQVLRAARIAGVDQF
VNRHPDGFELQVGEGGANLSGGQRQSIALARALLLAPPILVLDEPTNAMDNSSEEGFKQR
FAAELDGQTLILVTHRMSLLSLVERLIVMDGGHIVADGPKQHVLEALRQGQIKVAV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagcctgctgagcctaggacccgccaatcccaagtttgacgatccgctattg
ctggctttgttatcggtctgcaaaatcctgcatattccgcaaactgcgacggcgctggtg
gccggcctgccgttgccggagcataaactaacccccgatttgtttcctcgcgccgccgag
cgcgccggtttgcgcgccagcttgttgcgccggccgttggaacgaatctctacgctggtg
ctgccggtcgtgctgttactgaaagacggcaccacctgcgtgttggtcggccgggacggc
gagcgttgtaccgtcatcctcccggaaaccgaaagcggcgaaaaaaccgtcgcagccgcc
gagttgaatgcgctatacagcggcttggcgttcttcgttcaggtaagccaccatttcgat
gccagaagcggcgatgcgggtctgcccaaagccaagcattggttttgggacgtcatcgcc
aaatcctggccgatttatgccgaagtgctggcggcgtcgctgttgatcaacatttttgcg
ctggccgcgccgctgttctttatgaacgtttacgaccgggtggtgccgaaccgcgccctg
gaaaccctttgggtgtttgcgctaggcatcgtgatcgtattcggcttcgaattggcgatg
aaactgttgcgcagctatttcatcgacgccgccggcaagcgcgcggatatcgtgctgtcg
gcgacgattttcgaaaaactgatgaatatccggatggaggccaagccggtttcggtcggc
ggttttgccaacaacctcagcgaattcgaatcgttccgcgaatttctgacttccgccagc
ttggccacgttgatcgacctgccgtttctgatcctgttcatcttgattatttacagtatc
ggcggccatttggcctggattccgctgggtatattgccgctggcggtattggtcggcatc
gcgttgcaggcgccgctcagggccacaatccaggccttgttcaaagccggtgccgagaaa
aacgcgacgctggtcgaggccctgtccaacctggaaacgctgaaggccgccggcgccgag
ggccaactgcaggcgcgttgggagaaaggcatcggcgagatggcccggcttggtttgaag
tcgcggttttattccggcttgaccgtcaatttgacggcttttttccagcaattggcctcg
gtgtttgtcgtcgtcgccggcgtttaccgcattgccgacggcgacttgaccaccggcggc
ctggtggcttgcaccatgctgacctcgcgggcgctggcgccggtcggccaggtggcggcg
ttgttgacccgttaccaccatgctcgggcggctttagattccttgaatcggatgatggct
ttgccggttgagcgcgaaccgggccgggactacttgcaccggccgcgcttcaacggcgat
atcgaattcaagcacgtcgccttccactatccgcagcaacccgtcaaggcgttggaaggg
atctcgttcaaaatcaaagccggcgaacgggtcggcgtgatcggccggatcgggtccggc
aaaagcacgctggagcgtttgatcctgggtttgtaccaggcccagcagggctcgattttg
atcgacggcgccgatatccgccaaatcgatccggccgacttgcgcagccagatcggctac
gtgccgcaagacatttcgctgatgtacggcagcgtcaaggacaatatcgcgctcggctcc
ggtttcgtcgacgacagccaagtgttgcgggcggcgcggatcgccggcgtcgaccagttt
gtgaataggcatccggacggattcgaactgcaggtcggcgagggcggcgccaatttatcc
ggcggccaacgccagagcatcgccctggcgcgggccttgttgctggcgccgccgattttg
gtgctggatgagccgaccaacgcgatggataacagcagcgaagaaggtttcaagcagcgg
ttcgccgccgaactggacggccagaccttgattctggtcacgcaccgcatgtcgttgttg
agtctggtcgagcgtttgatcgtcatggacggcggccatatcgtcgccgacggcccgaaa
cagcatgtgctggaagccttgcgccaaggccagatcaaggttgcggtgtga
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