Methylomonas sp. DH-1: AYM39_04600
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Entry
AYM39_04600 CDS
T04396
Name
(GenBank) forkhead-associated protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
AYM39_04600
Enzymes [BR:
mdh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AYM39_04600
Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AYM39_04600
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Gene cluster
GFIT
Motif
Pfam:
FHA
SLT
Yop-YscD_cpl
DUF874
ATG14
FBF1
Motif
Other DBs
NCBI-ProteinID:
ANE54537
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Position
974682..976361
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AA seq
559 aa
AA seq
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MEDDKTVLMRSKPAAAQADPDRTLLVGANRLAASLVDAAGRSVAGYTFTGDFRVGRSADN
DIVIQDPAVSRHHCAIKFNGGGWWLHDLNSSHGVYLEGLRVPGKVKLALPATIGFGPALF
GLKLNDPTAQQKPVLPQPGAVAAVMPAESQPPQHGQSRPQLTPEQIRNRLLSEQESEDMG
DYTRMVRGFIREDRTVRTKSYKKWIWSLAGLLVLVAGLAVYQRFALDNARTLAINMFYDI
KTLEVSLSQADIRLEQSAETLAQTLAAVNDEKLRVSQERIKEEQLRIQQEKKRLAEERER
LKAMKVKYQAYLQQVDFLRLSFPTDEEYERELVTRVARGFGESELEVPEEFVAKVKQYID
NWKNSSRLQLAVRNLETNQYAPIVLSELEKEGLPAYFLYLPLQESNYDSKAVGPETRFGI
AKGAWQFLATTGQDYGLVPGPLANTRDYDEQDARFDFNQATRAGAKYLKYIYGTQAQASG
LLVMASYNYGHNKVRSMVENMPDNPRDKNFWKFIQQYEIPAETYDYVFYIVSAAVIGEDP
KHFGFDFKPPLLAALPLPG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacaaaaccgtactgatgcgttcgaagccggcagccgcgcaggccgatccg
gatcggactttgctggtcggggcgaataggttggcggccagtttagtggacgctgccggc
cgtagcgtcgccggttatacctttaccggggattttcgcgtcggccgctccgccgacaac
gatatcgtaatccaggacccggcggtcagccgccaccattgcgcaatcaaatttaatggt
ggcggttggtggttgcacgatctgaacagcagccacggcgtgtatctggaggggctgcgg
gttccgggcaaagtcaaattggcgctaccggcgacgataggtttcggcccggcactgttc
gggctgaagctcaacgaccccaccgcccaacagaagccggtattgccgcaaccgggcgcc
gtcgccgcagtcatgccggccgagtcgcaaccgccgcagcatggtcaatcccgcccgcaa
ttgacgcccgagcaaatccgtaaccggctgttgtcggagcaggagtcggaagacatgggc
gactatacccgcatggtgcgcggctttatccgcgaggacagaaccgtccgcaccaaaagt
tacaagaaatggatctggtcgctggccggtttgctggtgttggtcgccggtttggcggtg
taccagcggtttgcgttggacaatgcccggacgctggcgatcaacatgttctacgacatc
aagacgttggaggtcagcctgtcgcaagccgacattcgtttggagcaaagcgcggaaacc
ttggcccaaactctggccgcggtcaacgacgaaaaattgcgggtgtcgcaggaacggatc
aaggaagagcaattgcgcatccagcaggaaaagaaacgtctggccgaagagcgcgagcgg
ttgaaggcgatgaaagtcaaataccaagcctatctgcagcaagtcgatttcctgcggctg
agttttccgaccgacgaggaatacgagcgggaattggtgacgcgggtggcgcgcggtttc
ggcgaaagcgaactggaagtgccggaagagttcgtggccaaggtcaagcaatacatcgac
aactggaaaaacagttcccgcctgcaactggcggttcgtaacctggaaaccaaccaatat
gcgcctatcgtattgagcgagctggaaaaggaaggcttgccggcatactttctgtatctg
ccgttgcaggaaagcaattacgacagcaaagcggtcggtccggaaacccgtttcggcatc
gccaagggcgcttggcagtttttagcgacgaccggccaggattacggcttagttccgggg
ccgttggctaatacccgcgattacgacgagcaggacgcccggttcgacttcaaccaggcc
acccgcgccggcgccaaatatttgaaatacatttacggtactcaggcccaagcttcgggc
ttattggtcatggccagttacaactacggccacaacaaggtacgcagcatggtggaaaac
atgccggacaatccgcgcgacaagaatttctggaaattcatccagcaatacgaaattccg
gccgagacctacgattacgtgttttacatcgtctccgccgccgtgatcggcgaagacccg
aagcatttcggcttcgatttcaaaccgccgttgctggcggcgctgccgttaccgggctag
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