Methylomonas sp. DH-1: AYM39_05075
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Entry
AYM39_05075 CDS
T04396
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00220
Arginine biosynthesis
mdh00240
Pyrimidine metabolism
mdh00250
Alanine, aspartate and glutamate metabolism
mdh01100
Metabolic pathways
mdh01110
Biosynthesis of secondary metabolites
mdh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AYM39_05075 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AYM39_05075 (carB)
00220 Arginine biosynthesis
AYM39_05075 (carB)
Enzymes [BR:
mdh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AYM39_05075 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Epimerase
Peripla_BP_4
GP68
Motif
Other DBs
NCBI-ProteinID:
ANE54620
UniProt:
A0A172U5M7
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All DBs
Position
1067568..1070789
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILLLGAGPIVIGQACEFDYSGTQACKALREEGYRVILVNSNPATIMTDPDM
ADAIYIEPIDWQTVEKIIEKERPDAILPTMGGQTALNCALALDKHGVLAKYGVEMIGASK
EAINKAEDRDLFNQAMRKIGLEVAKSKVAHSMEEAFAAQEEVGYPTIIRPSFTMGGSGGG
IAYNREEFIEICERGLDLSPTNELLIEESILGWKEFEMEVVRDRHDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPDNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPTIDYVVTKVP
RFAFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVDGLDEVADLSDPNA
QDIILRELRYPGPQRLWYLADAFRSGLSFEEIHQACKIEPWFLAQVEDLIATEKALSTKT
LATLEPGELLRLKRKGFSDKRLAKLLETKESEVRNVRHKKCIRPVFKRIDSCAAEFASDT
AYLYSTYEQECEAKPSEREKIVILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDFDTSDRLYFEPLTLEDVLEIIDLEKPKGVIVQYGGQTPLKLARALEAAGAPI
IGTSPDSIDLAEDRERFQKLLERLNLLQPPNATARSVEQAVSSAKEIGYPLVVRPSYVLG
GRAMEIVFNEDGLRRYMKEAVSVSNDSPVLLDRFLDDAVEMDVDAIYDGETVLIGGLMEH
IEQAGVHSGDSACSLPPYDLPAHLQDQLRAQVAKMAEALGVRGLMNTQFAIQGETVYVLE
VNPRASRTAPFVSKATGYPLAKIAARCMVGKSLKEQGVTEERIPEYFSVKEAVFPFIKFP
GVDPLLGPEMKSTGEVMGVGKTFGEAFAKSQRACGVDLSHSGKVLISIRDADKPKLPELA
NMLIAKNYEIVATPGTARVLREAGIACKDVFKVNQGRPHTVDMIKNGEIQMVINTTDGAK
AVADSFTMRREALQRKVTYYTTMAGARAACYALGELDAGDVNCLQDLHNSFNG
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaaccgacataaaatcgattttattactgggcgccggaccgatcgtcatc
ggccaggcttgcgagttcgactattccggcacccaggcctgcaaagcgttgcgcgaagaa
ggctaccgggtgattctggtcaactccaatccagccacgatcatgaccgatccggacatg
gccgatgctatctacatcgagccgatcgactggcaaacggtggaaaaaatcatcgagaag
gagcgcccggacgcgatcctgccgactatgggcggccagaccgcgctgaattgcgcactg
gcgttggacaagcacggcgtgctggccaaatacggcgtcgaaatgatcggcgcgagtaaa
gaagccatcaacaaagccgaggatcgcgacctgttcaatcaggccatgcgcaagatcggc
ctggaagtcgccaagtccaaagttgcccacagtatggaagaggcctttgccgctcaggaa
gaagtcggctatccgaccatcatccggccctcgtttacgatgggtggtagcggcggcggc
attgcctacaaccgcgaggaattcatcgagatttgcgaacgcggcttggatttgtcgccg
accaacgagctgttgatcgaggaatcgattctgggttggaaggaattcgaaatggaggtc
gtgcgcgaccgccacgacaattgcatcatcgtctgctccatcgaaaacttcgatccgatg
ggcgtgcacaccggcgactcgatcaccgtggcgccggcgcaaaccttgaccgataaggaa
taccaaatcatgcgcaacgcctcgctggcggtattgcgcgaaatcggcgtcgataccggc
ggttccaacgtgcagttcgccgtcaatcccgataacggtcgcttgatcgttatcgaaatg
aatccgcgggtcagccgttcgtcggccttggcctccaaagccaccggtttcccgattgcc
aaagttgcggcgaaactggcagtcggttttaccttggacgaactgcgcaacgagatcacc
ggcggagcgacgccggcctcgttcgagccgactatcgactatgtcgtcaccaaggtgccg
cggttcgcgttcgagaaattcccgcaagccaacgaccggctgaccacgcaaatgaaatcg
gtcggcgaagtcatggcgatcggccgtaccttccaggaatcgctgcaaaaagccttgcgc
ggactggaagttggcgtcgacggcttggacgaagtggcggatttgagcgatccgaacgcg
caggacattattctgcgcgagctgcgctatcccggtccgcaacgcttgtggtatttggcc
gatgcgtttcgcagcggcttgagtttcgaagaaatccaccaggcctgcaaaatcgagcct
tggtttttggcccaggtcgaggatttgatcgctactgaaaaagccttgtcgaccaaaacc
ctggcgaccttggagcccggcgaattgctgcggttgaaacgcaaaggtttctccgacaaa
cgtttggcgaaattgctggaaaccaaagaatccgaagtacgcaacgtccgccacaagaaa
tgcattcggccggtgttcaagcgcatcgattcctgtgccgcggagtttgcttccgacacc
gcttatttgtattccacctacgagcaggaatgcgaagccaagccgtcggaacgggaaaaa
atcgtcattttgggcggcggtccgaaccggatcggccagggcatcgaattcgactattgc
tgcgtacatgccgccttggcgctgcgcgaggacggttacgagaccattatggtcaactgt
aatcccgaaaccgtttcgaccgacttcgacacttccgaccgtttgtatttcgagccgttg
accttggaagacgtgctggaaatcatcgacctggagaaacccaagggtgtgattgtgcag
tacggtggccaaaccccgctgaaactggcacgggccttggaagcggctggcgctccgatt
atcggcacttcaccggattcgatcgatttggccgaagaccgcgagcggttccagaaattg
ctggagcgtctgaatctgttgcaaccgcccaacgccaccgcgcgttcggtcgagcaggcg
gtcagttcggcaaaggaaatcggctatccgctggtggtgcgtccatcctacgtgttgggt
gggcgggcgatggagatcgtgttcaacgaagacggcctgcgccgttacatgaaagaagcc
gtcagcgtgtcgaacgattcgccggtgttactggaccggttcctggacgacgcggtggaa
atggatgtcgatgcgatttacgacggcgaaaccgtgttgatcggcggcttgatggagcac
atcgaacaggccggcgtgcattccggcgactcggcgtgctcgctgccgccttacgatttg
ccggcgcatttgcaagaccagttacgcgcccaggtggcgaagatggccgaagctttgggt
gtgcgcggtttgatgaatacccagtttgcgattcaaggcgagaccgtatacgtgctggaa
gtgaatccgcgcgcttcgcgtaccgcgccgttcgtgtcgaaagccaccggttatccgttg
gcgaaaatcgccgcgcgctgcatggtcggtaagtcgctgaaagagcagggcgtgaccgaa
gagcgcattcccgagtatttctcggtcaaggaagcggtgttcccgttcatcaaattcccc
ggcgtcgatccgctgttggggccggagatgaaatccaccggcgaggttatgggcgtcggt
aaaaccttcggtgaagcctttgccaagtcgcaacgggcttgcggcgtggatttgagccat
agcggcaaggtgttgatcagtattcgcgatgccgataaacccaagttgccggaattggcg
aatatgctgatcgccaaaaattacgaaatcgtcgcgactccgggtaccgcgcgcgtgttg
cgcgaggccgggatcgcttgtaaagacgtgttcaaggtcaaccaggggcggccgcatacc
gtggatatgatcaagaacggcgagatccagatggtcatcaacacgactgacggcgcgaaa
gcggtagcggattcgttcacgatgcggcgcgaagcgctgcagcgtaaggtcacctactac
acgacgatggccggcgccagagcggcttgctacgcgctgggcgagctcgatgccggcgac
gtcaattgcctgcaagatttgcataacagttttaacggataa
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