Methylomonas sp. DH-1: AYM39_06180
Help
Entry
AYM39_06180 CDS
T04396
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AYM39_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_06180
Enzymes [BR:
mdh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AYM39_06180
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AYM39_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Oscp1
Phage_Mu_Gp48
Pgp3_helical
GRDB
Motif
Other DBs
NCBI-ProteinID:
ANE54809
UniProt:
A0A172U610
LinkDB
All DBs
Position
complement(1316757..1316990)
Genome browser
AA seq
77 aa
AA seq
DB search
MTRRKNAAQFEEAMAELEKLVEQMERGDITLEESLKFFERGVGLTRTCQQALQDAEQKVQ
ILLEKNGQQTLEPFTDE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgacgagacgcaaaaacgctgcccaatttgaagaagccatggccgaactggaaaagttg
gtcgagcagatggagcgcggcgatattacgctggaagaatcgttgaaattcttcgaacgc
ggcgtcggcttgacccgcacctgccagcaagccttgcaggacgccgaacagaaggtgcag
attttattagaaaaaaacggccagcaaactttggagccattcaccgatgagtaa
DBGET
integrated database retrieval system
