Methylomonas sp. DH-1: AYM39_06275
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Entry
AYM39_06275 CDS
T04396
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdh02000
]
AYM39_06275
Transporters [BR:
mdh02000
]
Other transporters
Pores ion channels [TC:
1
]
AYM39_06275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ANE54823
LinkDB
All DBs
Position
complement(1338519..1340528)
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AA seq
669 aa
AA seq
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MNKSLSLFRIATAFLAWLPDSLHAETDLTDLNLEELLAVKITSVAKKVQSLQDSAAAVFV
ISDEDIKRSGATSIPDALRLAPGIDVGRIDSNKWAVSARGFNGRFANKLLVLIDGRSLYT
PAFAGVYWELQDVMLEDVERIEVIRGSGAALWGANAVNGVVNIITKHSADTQGGLLSAGG
GSEELGFGAFRYGKQINASTSARVYLKGFERDALARSAGQSAGDAWNKMQGGFRLDSDLS
DADSLTLQGDMYAADLNQQLLLAALAAPYRQTVGDRAMTSGGNIISRWQHTFSDTSSSTL
QLYFDSYNRREAYIEEERHTGDLDFQHRFALNDWNDIIWGLGFRYSSSDVTDIYPDLISF
NPTDRDNSYYSGFVQDQLTLVDDTLWLTLGSKLEHNDFTGFEVQPTARLMWGPHPNHRVW
GAVSRGVRIPSRVDADMSLVGQTLPPFTGQNATPFPLALAVMGSQTYQAEQLLAYEVGYR
FSPNPAFSLDIAGFYNNYSTPRSYQPGAIDTSQLPAYLRQPFYIDNGGAGRTYGIETSVV
MKMLGWWRWDVSYSALKSELSSNAYYREAISPQHKLSLRAALNPVSDVTLDAWLRYVDNA
SAFTLAGPAYIRSYTTLDLRLGWKLNRAVELALVGQNLLDNRHLEYIQESFTLPTEVQRG
VYGKITWEF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctctttctttatttcggatcgcaacggcatttctggcctggctaccggat
agcctgcacgccgaaaccgacctgaccgatctgaatctggaagaactgctggccgtaaaa
atcacttcggtggcaaaaaaagtgcagtccttacaggattcggcggcggcggtattcgtc
atcagcgacgaagatatcaagcgctccggcgccaccagcatccccgacgcactgcggttg
gcgccgggcatcgacgtcggccggatcgactccaacaagtgggcggtcagtgcgcgcggt
ttcaacggccgtttcgccaataaattgctggtgctgatcgacggtagaagcttgtacacg
ccggcattcgccggcgtgtattgggaattgcaggacgtgatgctggaagacgtcgaacgc
atcgaagtcatccgcggttccggcgcggccttgtggggcgccaatgccgtcaacggcgtg
gtcaacatcatcaccaaacatagcgccgacacccagggcggcttgctcagcgccggcggc
ggcagcgaggaactcggcttcggcgccttccgctacggcaagcaaatcaacgcctcgacc
agtgccagggtctatctgaaaggtttcgagcgggatgcattggcccgctccgccggccag
agcgccggcgatgcctggaacaaaatgcagggcggcttccgcctcgattccgacctgtcc
gacgccgattcgctgacgctacaaggcgacatgtacgctgccgacctgaaccaacaactg
ctgctcgccgcattggccgcgccttaccggcaaacggtcggcgaccgggcgatgaccagc
ggcggcaatattatcagccgctggcagcacactttctcggacacgtcgagcagcacgctg
caactgtatttcgatagctacaaccggcgcgaagcctatatcgaagaggaacgccatacc
ggcgacctggattttcaacaccgcttcgcgctgaacgattggaacgacattatctggggc
ttgggtttccgctactcctcttccgacgtcacggatatctatccggatctgatttccttc
aatccgaccgaccgcgacaacagctactacagcggctttgtgcaagaccaactgacgctg
gtagacgatacgctttggctgacgctgggctcgaaactggaacacaacgatttcaccggc
ttcgaagtgcagcccacggcgcgcttgatgtgggggccgcatccgaaccaccgcgtatgg
ggcgcggtatctcgcggggtacggattccgtcgcgggtcgacgccgatatgagcttggtg
ggccaaactctgccgccatttaccggccaaaatgcaacgccgtttccgttggcgctcgcc
gtgatgggttcgcaaacttaccaggccgaacaattgctggcatacgaagtcggttaccgc
ttcagtccgaatccggccttttcgttggatatcgccggcttctacaacaactacagcacg
cctcgttcataccaacccggcgccattgacacctcgcaactgccggcctatctgcgccag
ccgttttacatcgacaacggcggcgccggccgtacttacggtatcgaaacctcggtcgtc
atgaaaatgctgggctggtggcgttgggacgtcagctacagtgcgctgaaaagcgaactc
agcagcaacgcctattaccgggaagcgatctcgccgcagcataaactttcgttgcgggcg
gcattgaatccggtatcggacgttaccctggacgcctggctgcgctacgtcgacaacgcc
agcgccttcacgctggccgggccggcctacatccgctcctataccacgctggatttacgg
ctgggatggaagttgaaccgcgcggtggaactggcgctggtcggccagaatctgctggat
aaccgccatttggagtacatccaagaatcgttcaccctgccgacagaagttcagcgcggc
gtttacggcaaaatcacctgggagttttag
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