Methylomonas sp. DH-1: AYM39_06930
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Entry
AYM39_06930 CDS
T04396
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdh03036
]
AYM39_06930
Chromosome and associated proteins [BR:
mdh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AYM39_06930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SMC_hinge
AAA_29
CCDC39
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ANE54938
LinkDB
All DBs
Position
1495674..1499171
Genome browser
AA seq
1165 aa
AA seq
DB search
MKLEKIKLAGFKSFVDPTTIPINGNLTAIVGPNGCGKSNIIDAVRWVMGESSAKHLRGGN
MADVIFNGSSGRKPVSIASVELVFDNSEGKAGGEYAKYATISIKRQVSRDGQSLFMLNGS
KCRRKDITDLFLGTGLGSRSYAIIEQGTISRMVEAKPEDLRVHIEEAAGVSKYKERRSET
ETRMRHTRENLERLNDLRDEVEKQIKNLARQAEKAEKYTELKKLERQFKQELLAMRWRNF
QRSAQQLEAKLQSIAEEHNRLFVLLRDTEKAMELKRGEQKAQQQHLDSTQAEYTALVAEV
SRLEQTIKHNQKSHEETLVEIERLKQQAEHAQAECELDRQQLEEIRQTLLEAEETMVVAK
EREEDLLGIQQDAHLQKQQWQQQWEAFLAENAGYREQVEVQRTKLVQLENQSRQLQARLD
KLHSERHGLADTQLQLELEALDSSIELIEAERRQLQHDLDAVLQRIGELRPEIKQIQERL
HADRAELQKVNGKISSLELLQQHAMGKDKKELGAWLEQMGLEQQPRLAEFVEADEGWETA
AETVLGSYLEAICIDSADAILAELQELNKQSLIVFETHPAAAGSAAAETLAGKVRSRWRL
DSLLSGIYCAESMRQARQLPLQAHESVVLADGTWLGRDWIKVSRGSDSKAGVLHREKELR
ELKLRQSELQMAIAEHEQQLEHCEHELKAAESHREQYQQKEKLLSAEFSAKSAEYSAQAA
RFEQQKRRLEQLDHEIDEIGQHLAELVESISEAELIKQDAELALGDLGERKAELERLSQE
LQARQQNTDASVDEARRHLHRLHAQIESLKSSEILTAKQIERLQVQHQQAADRMAELEHK
LQYALAPLDDERMQLEELLEKKQQFEDGLRAERQAQQASEQSVSQLAEQYSQTQRALEKQ
KEALDQIRFEQQDSKVRQQTVAEQLAEVDADPEAILANLREGASESQWKREVDELVEQIE
RLGSINLTAIEEYKTQSERMKFLNEQHDDLVDALNTLDQAISKIDRESRQRFKETFDKIN
NGLKEKFPRLFGGGQAYLELTEDDLLEAGVNIIARPPGKRNSSIHLLSGGEKALTAVALV
FSIFELNPAPFCLLDEVDAPLDDANVVRFSKMVEDMSATVQFLYISHNKVTMEIAKHLAG
VTMKEPGVSRMVAVDIDEAVSMAEN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagaaaatcaaacttgctggattcaaatccttcgtcgatcccaccacgata
ccgatcaacggcaatctgaccgcgatcgtcgggcctaacggttgcggcaagtccaatatc
atcgatgcggtgcgctgggtcatgggcgagagttcggccaagcacttgcgcggcggcaat
atggccgatgtgattttcaacggctcgtccggccgcaagccggtcagcatcgcctcggtg
gagctggtattcgacaacagcgaaggcaaggccggcggcgaatacgccaaatacgcaacg
atttcgatcaagcgccaagtcagccgcgacggccagtcgctattcatgctcaacggctcc
aaatgccggcgtaaagatattaccgatttgtttctgggcaccggtttgggctcgcgcagc
tacgcgattatcgagcagggtacgatttcgcgcatggtcgaagccaagccggaagatttg
cgggtccatatcgaggaggcggccggcgtctccaaatataaggagcgccgctcggaaacc
gaaacccgcatgcgtcacacccgggaaaatctggaacgcttgaacgatctgcgcgacgag
gtggaaaagcagatcaaaaatctggctcgccaagccgaaaaggccgaaaaatacaccgag
ttgaaaaaactggagcggcaattcaaacaggaattgctggcgatgcgctggcgcaatttt
caacgttcggcgcaacaactcgaagccaagttgcagagtattgccgaagaacataatcgc
ttgttcgtgttgctgcgcgataccgagaaggctatggagctgaaacgcggcgaacaaaaa
gcccagcagcagcatctggattcgacccaggcggaatacaccgcgctggtagccgaggtc
agccggctggaacaaaccatcaagcacaaccagaagagccacgaagaaaccctggtcgag
atcgagcgcttgaagcagcaagccgagcacgcgcaggccgagtgcgagttggataggcag
caactcgaagaaatccggcagacgctgctggaggccgaagaaaccatggtggtggccaag
gagcgcgaggaagatttgctgggtatccagcaggacgcgcatctgcaaaagcagcaatgg
caacagcaatgggaagctttcctggccgaaaatgccggttatcgggagcaagtcgaagtg
caacgcaccaagctggttcaattggaaaaccaaagcaggcagttgcaagcccggctcgat
aaattgcacagcgaacgccacggtttggccgatacccagttgcaactggaattggaagcg
ttggatagcagcatcgaactaatcgaagccgagcgccggcagttgcagcacgacttggat
gcggtattgcaacgtatcggcgagttgcggcccgaaatcaaacagattcaggaacgcttg
cacgccgatcgcgccgaattgcaaaaagtcaacggcaagatcagttcgctggaattgttg
cagcaacatgcgatgggtaaggacaagaaagagctcggcgcctggttggagcaaatgggg
ctggaacagcagccgcgcctggctgaattcgtggaagccgacgaaggttgggaaactgcg
gccgaaaccgtgttgggcagctatttggaagcgatctgcatcgacagcgccgacgcgatt
ttggccgagttgcaagagttgaacaagcaatcgctgattgtgttcgaaacccatccggcc
gccgccggctcggctgccgcggaaaccctggccggcaaagtccgcagccgttggcggctg
gacagtttgttgagcggaatttattgcgccgagtcgatgcggcaggcgcggcaactgccg
ttgcaggcgcacgaatcggtggtgctggcggacggcacttggttgggtcgggactggatc
aaggtcagccggggcagcgatagcaaggccggcgtgttgcatcgcgagaaagagttgcgc
gagttgaagttgcggcaaagcgaattgcagatggcgattgccgagcacgagcagcaactg
gaacattgcgagcacgagttgaaagccgcggaaagccatcgcgagcaataccagcagaaa
gaaaaattattgagtgccgagttctcggcaaaaagtgccgaatacagtgcccaggccgcg
cgcttcgaacagcaaaagcgccgcctggagcagttagaccatgagatcgacgagatcggc
cagcatctggccgagcttgtcgagagcatctccgaagccgaactgatcaaacaggacgcc
gagctggctttaggcgatctgggcgaacgcaaagccgaattggagcggctcagtcaggaa
ctgcaggcccgccagcagaataccgatgcctcggtcgacgaagcccgccggcatttgcac
cgtttgcacgcccagatcgaatcgttgaaatcgtcggaaatcttgaccgccaagcagatc
gagcgcttgcaagtgcagcaccagcaagcggccgaccgcatggccgaattggaacacaag
ctgcaatatgccttggcgccgttggacgacgagcgcatgcaactggaagagttgttggaa
aaaaaacaacaattcgaggacggcctgcgcgccgagcggcaagcgcaacaggccagcgag
caatcggtcagccagttggccgaacaatattcgcaaacccagcgggcgctggaaaaacaa
aaggaagccctggatcaaattcgtttcgaacagcaggacagtaaggtcagacaacaaacc
gtagccgaacaactggccgaagtggatgccgatccggaggccatactggccaacctgcgg
gaaggcgccagcgaaagccaatggaagcgcgaagtcgacgaactggtcgagcagatcgaa
cgcttgggttcgatcaacttgacggcgatcgaggaatacaaaacccagtcggaacggatg
aagttcctgaacgaacagcacgatgacttggtcgatgcgttgaatacgctggaccaggcg
atcagcaagatcgaccgcgaaagccggcaacgcttcaaggaaacgttcgacaagatcaac
aacggtctgaaagagaagtttccgcgcttgttcggcggcggccaagcctatctggaattg
accgaagacgatttgctggaagccggcgtcaacattattgcccggccgcccgggaagcgg
aatagctctatccatctgttgtccggcggcgaaaaggccttgaccgcggtggctttggtt
ttctccattttcgaactgaatccggcgccgttttgtttgctggacgaagtcgacgcgccg
ctcgacgacgccaatgtcgtgcggttttcgaagatggtggaagacatgtcggcaaccgtc
caatttttgtacatttcacacaacaaagtcacaatggaaattgcaaaacatctagcaggt
gttaccatgaaggagcctggggtatcccgaatggtggcggtggatattgatgaagcggta
agcatggcggaaaactga
DBGET
integrated database retrieval system
