Methylomonas sp. DH-1: AYM39_08715
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Entry
AYM39_08715 CDS
T04396
Name
(GenBank) hypothetical protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AYM39_08715
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mdh01005
]
AYM39_08715
Lipopolysaccharide biosynthesis proteins [BR:
mdh01005
]
O-antigen repeat unit
AYM39_08715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
DUF5425
Motif
Other DBs
NCBI-ProteinID:
ANE55250
UniProt:
A0A172U7F1
LinkDB
All DBs
Position
1908708..1909643
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AA seq
311 aa
AA seq
DB search
MSFEVKESIEAEIACVIVTYNPDRNIFYSMILQLLKSAVSIYIIDNWHSNDSTSYVRELS
KRYSDKIKLICLEKNYGIAKALNIGVNQAMEDNHKYALLLDQDSIPQDGLLEEVLDAANM
LSKIEPQTVAIGPRLYDPRSNSYVKFASLKWGVWKKVGCGSNGENLIKCEFLNSSGSLIF
LRHWEAVGPFREDFFIDHVETDWYMRARYLGLKCYGLCSKRHLIHYMGDSVCRYWLFGWM
YMPRRSPERHYTIVRNAIRLSKSKYTPILWGVNAALKIIFTFFYFSTFDRDRRNQRCSII
NGIRDGLLSGD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaagttaaagaaagtatcgaagctgagatagcttgcgtaatagttacatac
aatccagataggaatatattttattccatgattttacaattgttgaagtcggctgtatca
atttatattattgacaattggcattccaatgattcgactagttatgtaagggagttgtct
aagcggtattctgataagattaaattgatttgtttggaaaaaaactatggtattgcgaaa
gcgttaaatatcggcgtcaatcaagcgatggaggataatcataaatatgcgcttttgtta
gatcaagatagtattcctcaggatggtttgcttgaggaagtgttagacgcagcaaatatg
ctttcgaagattgagccgcaaacggttgcgatcggtccacgcttgtatgacccgagatca
aatagttatgtcaagtttgcctcgcttaaatggggtgtttggaaaaaagttgggtgtgga
agtaacggcgaaaatctcattaaatgtgaatttcttaattcgtcaggcagtcttattttt
ttgaggcactgggaagctgtaggtccttttcgcgaagatttttttatagatcacgtggaa
acagactggtatatgagagccagatatttaggtcttaaatgctatgggttgtgtagtaag
cgtcatcttatacactatatgggagacagtgtgtgtcgttattggttattcggctggatg
tacatgccgcgtagatccccggaacgccactatacgatagtacggaacgcgattcgacta
tctaaatcaaaatatacgcccattttatggggggttaatgcggcattaaagattatattt
acttttttttatttttcgacttttgatagagataggagaaatcaaagatgtagtattata
aatgggattcgtgatggacttttgtctggggattga
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