Methylomonas sp. DH-1: AYM39_11260
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Entry
AYM39_11260 CDS
T04396
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_11260
Enzymes [BR:
mdh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AYM39_11260
DNA repair and recombination proteins [BR:
mdh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AYM39_11260
Prokaryotic type
AYM39_11260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANE55699
UniProt:
A0A172U8I7
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All DBs
Position
2527492..2528877
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AA seq
461 aa
AA seq
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MSKPRYRTSLFIFRRDLRLADNTALNAALQSSQRVLACFVFDPRQIEAHPYRSQPALQFM
LESLNDLQTQCLAHGGRLYLFGERPEAVVELLHRQQSIEAVFVNRDYTPFSRQRDRELEL
CCEKLGIGFHSHADLLLNEPERVLTDKGLPYQVFTAFHKKAVQNPVAAAEGLASGRFYKA
VVDADRPELLKSLSQPQQNALAGGRQAALQHLAALAACRDYSQTRDFPELDTTSHLSPYL
KFGCCSVREAYQAIQVQLGPDHALLRQLYWRDFFSHIAYHFPHVFGHAFDRRLDGLRWRN
AQDDFWAWANGQTGFPIVDAAMRELNQTGWMHNRLRMVAASFLVKDLHVSWRWGERYFAQ
HLLDYDPCVNNGNWQWAASTGCDAQPYFRIFNPWLQQKKFDPDCRYIKTWLPELQGYSAK
AIHNWEKAPVAGDYPPPRVNHAEQSRSIKAQYQTLLSNQPT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgcgttaccgaacttccttatttattttccgccgcgacctgcgcctggca
gacaacaccgcattgaacgcggcattgcaaagctcgcagcgggtgttggcctgcttcgtt
ttcgatccgcgccagatcgaggcccacccctaccgaagccaaccggcgctgcaattcatg
ctggaatcgttaaacgatttgcaaactcagtgtctggcgcacggcggccgactctatctg
ttcggcgagcggccggaagcggtcgtcgaacttctacaccggcagcaaagtatcgaagcg
gtattcgtcaatcgggattacacgccgtttagccgccagcgcgaccgggaactagagtta
tgttgcgaaaaattgggcatcggcttccatagccatgccgacctgttgctaaacgagccg
gaacgggtattgaccgacaaaggcttaccctaccaagtgtttaccgcctttcacaaaaaa
gcggtgcaaaatccggtggctgccgcggaaggcctggctagcgggcgcttttacaaagct
gtggttgacgccgaccggccggaattgctgaaaagcctgagccagccgcagcagaatgcc
ctagccggcggccggcaagcggcattgcaacacttagcggcattggcggcatgccgggat
tacagccagacccgcgattttccggaactggacaccaccagccatttgtcgccctatctg
aagttcggctgttgctcggtacgcgaggcctaccaagccatccaagttcagcttgggccc
gaccatgcgctgttgcggcaattatactggcgcgattttttcagccatatcgcctaccat
tttccgcacgtattcggccatgctttcgaccgccgtctggacgggctgcgctggcgcaat
gcccaagacgatttctgggcctgggccaacggccaaaccggtttccctatcgtcgacgcg
gcgatgcgggaattgaaccagaccggctggatgcacaatcggttacgcatggtcgccgcc
tcgttcctggtcaaagacctgcatgtgtcctggcgctggggcgagcgttatttcgcccag
catctactcgattacgacccttgcgtcaataacggcaattggcaatgggcggcgtcgacc
ggctgcgacgcgcaaccgtatttccggattttcaacccgtggctgcaacagaaaaaattc
gatccagactgccgctacatcaaaacctggttgccggagctgcaaggttattcggctaaa
gccattcacaactgggaaaaggcgccagtggccggcgattatccgccgccgcgggtgaat
catgccgagcaaagtcgcagcatcaaagcccaataccaaaccttattgtccaaccaaccg
acctga
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