Methylomonas sp. DH-1: AYM39_12575
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Entry
AYM39_12575 CDS
T04396
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdh03021
]
AYM39_12575
Transcription machinery [BR:
mdh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYM39_12575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PhdYeFM_antitox
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
ANE55931
UniProt:
A0A172U968
LinkDB
All DBs
Position
complement(2820385..2821239)
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AA seq
284 aa
AA seq
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MSNSLALPINLSVGTFDSYLSLIAQMPKLSAEQEQDLALRYRDRGDLEAARELVMSNLRF
VVHVARGYSGYGLPMADIVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIKAEIHEFVIRN
WRIVKVATTKAQRKLFFNLRKFKKELSYLTREDAEAIAQNLDVDVKTVYEMERRLDGRDV
GLEPTGDDGEDQVQAPIAYLEQHGADPALMLEASDWEGRKEALLMDAMAGLDERSRDILS
SRWLVEEKATLHELADRYQVSAERIRQLEQNAMKKLRAAVTLEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagcttggctttacctatcaatttatcggttgggacgtttgattcatattta
agtttgattgcgcagatgcccaagctcagcgccgagcaggaacaggatctcgcgttgcgt
taccgcgatcgcggcgatttggaagccgcccgcgagctggtgatgtccaacttgcgattt
gtcgtgcacgtggcgcgaggatattcgggatacggtttaccgatggcggatatcgttcag
gaagggaatatcggattgatgaaggcagtcaaaagattcgaccccgatatgggtgtgcgc
ttggtgtcgttcgcggtgcattggattaaagccgaaatccacgaattcgtaatccgtaac
tggcgtatcgtcaaggtggcgacaaccaaagcgcaacgtaagttgtttttcaatttacgt
aaattcaaaaaagaactgagctatctgacgcgggaagacgccgaagcgattgcccaaaat
ctggatgtagacgtcaaaaccgtctatgagatggagcggcgtttggatgggcgagacgtg
ggattggagcctaccggcgacgacggcgaggaccaggttcaggcgccgattgcatacctt
gagcaacacggcgcggatccggctttaatgctcgaagctagcgattgggaaggccgcaag
gaagcgttgttgatggatgcaatggccggattggacgaaaggagccgggatatcttgtcc
agccgctggttggtcgaagaaaaagcgactttgcacgaacttgccgaccgttaccaggtc
tccgctgagcgcatccgccagcttgaacaaaatgcgatgaagaagctcagagccgcagtg
acgcttgaggcatga
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