Methylomonas sp. DH-1: AYM39_12620
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Entry
AYM39_12620 CDS
T04396
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03030
DNA replication
mdh03430
Mismatch repair
mdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM39_12620
03430 Mismatch repair
AYM39_12620
03440 Homologous recombination
AYM39_12620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdh03032
]
AYM39_12620
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_12620
Enzymes [BR:
mdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM39_12620
DNA replication proteins [BR:
mdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYM39_12620
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYM39_12620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ANE55938
LinkDB
All DBs
Position
2830388..2831104
Genome browser
AA seq
238 aa
AA seq
DB search
MSKPVTRQVVLDTETTGINPKEGHKVIEIGCVELVNRRLTRNHFHVYLNPDREIDAGAIE
VHGITNEFLRDKPRFADVVDDFMAFTAGAELIIHNAPFDVGFLNHELSLLPRETRTVESN
SSVFDTLAYARKKHPGARNSLDALCKRYGIDNSHRELHGALLDAEILADVYLLMTGGQAS
LLDEGDQQDGGLERAIVRLPADRPRLKVISCSDDELAAHRQRLAKITKASGGVCLWQE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccggtaacccgccaagttgtcctcgataccgaaaccaccggtatcaatccg
aaagagggccataaagtcatcgaaatcggctgcgtcgaattggtcaaccgtcggctgacc
cgcaaccatttccacgtctacctgaatccggaccgggagatcgacgccggggcaatcgag
gtgcacggcatcaccaacgaattcctgcgcgacaaaccgcgcttcgccgacgtggtcgac
gatttcatggcatttaccgccggtgccgaactgatcatccataacgcgccgttcgacgtc
ggcttcttgaatcacgaactgtcgctgctgccgcgagaaacccgtaccgtggaaagcaac
agcagcgtattcgacacgctggcttacgcccgcaaaaaacaccctggcgcccgtaatagt
ctggacgcgttgtgcaaacgttacggcatcgacaacagccaccgggaattgcacggcgcg
ttgctcgatgccgagattctggccgacgtctatttactgatgaccggcggccaagcctcg
ttgctggacgagggcgaccagcaggacggcggattagaacgcgccatcgtcagattgccg
gccgatcggccacggttgaaggtcatttcctgtagcgacgacgaattggcggcgcatcgg
caacgtttggcaaaaatcactaaagccagcggcggcgtctgcctgtggcaagaataa
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