Methylomonas sp. DH-1: AYM39_13580
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Entry
AYM39_13580 CDS
T04396
Name
(GenBank) hypothetical protein
Organism
mdh
Methylomonas sp. DH-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS_3
PAS_4
PAS
PAS_9
PAS_8
Hpt
HATPase_c_2
Endopep_inhib
TMF_TATA_bd
OmpH
Motif
Other DBs
NCBI-ProteinID:
ANE56107
LinkDB
All DBs
Position
3053997..3058916
Genome browser
AA seq
1639 aa
AA seq
DB search
MNASIPTHDDLDFRLLFESSPDLYLVLNANLEIVAVSDAYTRATLTRREDILGKTMFQIF
PDNPNDPTAEGQRNLRASLQRVLLSGKPDTMPVQKYDIPRADGEGFEERYWSPINIPILG
KDGKVAYVLHRAEDLTEFIRVKQLGVEQSQLNDTLRAQAVRMEVELFARNKEVASASAEL
KAANQELSRLYAKTLELDELKTRFFANVSHEFRTPLSLMLGPLEELLARFAPQGQSPAAS
EYEQLSLVHRNALRLLKLVNSLLDFSRIEAGRMEAAYEATDLAAYTAELASLFRSAADKA
GLRLTISCPALPEPVYVDRQMWEKIVLNLLSNAYKHTFAGEIEVALRWRGTAVELAVRDT
GVGIAPDQLGQIFDRFHRVPNVRSRSHEGSGIGLALVQELVRLHGGEVGVTSTPGVGSIF
SVTILTGTAHLPAEQLRPSQTAQAHPLGADFFAEEALRWELGTEHEHDNGQQTGTDNSPE
FNSAISAHIVVADDNADMRGYVARLLRKQGYAVTAVRDGLAALAAVRQRRPDLVLTDIMM
PGLDGIGLLSALREDRDTSTIPVILLSARAGEEERIQGLRHNADSYLTKPFGARDLLAHV
GACLEISRLRNQEADREFRSLAETMPQMVWATRPDGWNIYHNQRWVEYTGLTVEESYGHA
WISVLHPQDRPYAWEAWQRATQNNDSYSIECRIRRADGVYRWWLIRGVPLLNEQGRIQKW
YGTCTDIQDLKEAETAIRESEARLHFALEISNTGAWEVDLETQAVYRSIEHARIFGYTDT
ESAWSTDNFLEHVLDADRPKVAALLREAFAGGGEKQFECRIRRTDGEIRWIMVAGRYRVT
RTDGKSQVAVGVIQDITETKRAQDELKQHRDQLETLVASRTAELEQAMALTDAANRAKSA
FLANMSHEIRTPMNAVLGFCYLLEQRHLDAESLALVRKIHNAGHTLLSLINDILDFSKIE
AGRLEIERAPFRLTELLDNLAAIMATAAHNKDLELVITPPADIDALVGDALRLQQILINL
LSNAIKFTERGEVELRVSVESTDKQQCKLRFGVRDTGIGITSAQQQLIFSAFGQADSSIS
RRFGGTGLGLSISLQLVELMGGHLQVSSEVGQGSEFWFVLPLQRDQRVERRPTELARLEL
LIADDCASVREALAVVANSLGWLADTAASGEAALMQALTRLNGKRFYDAIVLDWKMPGLG
GLNAAKAIRQALKDKRRDIDPPILLMVAAHLREDLLAQPGIAEVAKVISKPITASTLYSA
VADSLHQAGPGGLLPAPTPIAAGKRRIPGVRVLVVDDSDINREVAKGVLEADGALVATAC
DGQDALEWLKAHPDAVDIVLMDLQMPRLDGYAATRFIREDKRWRELPIVALTAGAFQELR
DAAQESGMSDFIAKPFNVAQMMETIQRWTGCVAEKTNSDASGASATIGSASASPPVPAAG
AGEPELPAIDLPAARGLWGQLDVYRTYLDKFVAAYAQCGSAIADACGEGDLKAAAALAHK
LSGLAGTLRLHQVAELACKLEMRLNAGEAGFKLAADLQTAIDRVCAAVAAWQQADHPGAV
PEPVAAPLGDSLPTLFAGMLEALDRNDPDAAEIWLGRLRRHSNPIHLAELDALLADFDFR
GAEAAVRSLMQRLNFSIPE
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttccatcccaacccatgacgatttggattttcgcttactgttcgaatcgtcg
cccgacctctatctggtcttaaatgcgaatctggaaatcgtcgccgtcagcgatgcctat
acccgcgccacgctgacccggcgggaagacatcttgggaaaaacgatgttccaaatattt
cccgacaatcccaacgatccgaccgcggaaggccaacgcaatttacgcgcgtcattgcag
cgggtgttgctgtccggcaagccagacacgatgccggtgcaaaaatacgatatccccaga
gccgacggcgaggggttcgaggagcgctattggagcccgatcaatatcccgattctcggc
aaggacggcaaggtagcctatgtgctgcatcgggccgaagatttgaccgagtttatccgc
gtcaaacaattgggcgtagagcaaagccagctcaacgacactttgcgcgcccaggccgtc
agaatggaagtcgagctgttcgcccgcaacaaagaggtcgcatccgccagcgccgagttg
aaggcggctaaccaggaattgtcgcgcctgtatgccaaaaccttggaactggacgagttg
aagacccgattttttgccaacgtcagccacgaatttcgtacgccgctaagcttgatgctg
ggtccgctggaagagctattggcccgctttgccccgcaaggccagagtcctgccgcaagc
gaatacgagcagctcagcctggtgcatagaaacgccttgcgtttgctgaaattagtcaat
tcgctgctcgacttttcccgcatcgaagccgggcggatggaagcggcttacgaggcgacc
gatctggccgcctataccgccgagctcgccagcctatttcgatcggccgccgacaaggca
ggtctgcggcttaccatctcctgccccgccttgccggaaccggtgtatgtggatcggcaa
atgtgggaaaagatcgtactcaatcttttgagcaatgcctacaaacatacctttgccggc
gaaatcgaggtggcgctgcgctggcgcggaacagcggtcgaactggccgtgcgcgacacc
ggcgtcggcattgcgccggatcagctaggccagatattcgaccgcttccatcgggtgccg
aacgtgcgctcgcgcagccatgagggcagcggcatcggtctggctttagtgcaggaactg
gtccgcttgcacggcggcgaagtcggtgtaacgagtacgccgggcgtcggcagcattttt
tccgtaaccattcttaccggcaccgcacatttgccggcggaacagctccgtccgtcgcaa
acggcgcaagctcatccgctgggcgccgatttttttgccgaggaagcattgcgatgggag
ctgggaacggaacacgaacatgacaacggccaacaaaccggaacggacaactcgccggaa
ttcaattccgcgataagcgcgcacatcgtggttgccgacgataacgccgacatgcgcggc
tatgtcgcccggctgttacgaaaacagggctacgccgttacagcggttcgcgacggccta
gcggcgctagccgcggtacgccaacgccggcccgatctggtgttgaccgacatcatgatg
ccgggcctggatggcatcggtttgctgagcgcgctgcgcgaagatcgggataccagtacc
attccggtcattttgctgtcggcccgggccggagaagaagaacgcatacaaggcttgcgc
cacaatgccgacagctatctgaccaagccgttcggcgcgcgcgatttgcttgcgcatgta
ggagcctgccttgaaatctcgcggttgcgcaaccaagaggccgaccgcgaatttcgttcg
ctggcggagacgatgccgcaaatggtctgggccacccggcctgacggctggaatatctac
cacaaccaacgctgggtggaatataccgggcttacagtcgaagaaagttacggccacgcc
tggatctccgtgttgcacccgcaggataggccctacgcgtgggaagcctggcaacgcgcg
acccagaataacgacagctattccattgaatgccgcatccgccgggcggacggcgtttac
cgctggtggctgatccggggcgtgccgctgttaaacgagcaaggccggattcaaaaatgg
tacggcacctgtaccgacatccaagatttaaaagaagccgaaaccgctattcgggaaagc
gaagcaaggctgcattttgcgttggagatatcgaataccggcgcctgggaagtcgatttg
gaaacgcaggcggtttatcgctctatcgaacacgcccgcatcttcggctataccgacacc
gagtcggcatggtcgaccgacaactttttggaacacgtgctggacgcagaccgacccaag
gtcgcggcattactgcgggaggcgtttgccggcggtggcgaaaaacaattcgaatgccgg
attcgccgcacggatggcgaaatccgctggatcatggtcgcaggccgctatcgcgtcacc
agaaccgacggcaaaagccaggtcgccgtaggcgttattcaagacattaccgaaaccaag
cgcgcccaggacgagctcaagcagcaccgcgaccaactggaaacgctggtcgccagccga
accgccgaactggaacaagccatggcgttgacggacgccgccaaccgggccaagagcgcc
tttctggccaatatgagccatgaaatccgcacgccgatgaatgccgtgctgggtttttgc
tatctattggaacagcgccatttggacgccgaatcgctggccttggtgcgcaaaatccac
aacgccgggcatacgctactatccctgatcaacgatatcctcgacttttccaagatcgag
gccgggcggctggaaatcgagcgagcgccgtttaggctaaccgaactgctggacaacctc
gccgctatcatggcaacagccgcccataataaagatttggaattggttatcactccgccc
gccgacatcgacgcgttggttggcgatgccttacgccttcagcaaatattgatcaacttg
ctcagcaacgcgatcaaatttaccgaacgcggcgaagtcgagttacgcgttagcgtggaa
tccacggacaaacaacaatgtaagctgcgttttggggtgcgcgataccggcatcggcatt
accagcgcacagcagcaactgattttctcggctttcggccaagccgatagcagcatcagc
cgccgattcggcggtaccggcttgggcttgagcatcagcttgcaactggtggaactgatg
ggcggccacctacaagtaagcagcgaagtcggccagggcagcgaattctggttcgtgctg
ccgttgcagcgcgaccaacgcgtggaacgccggcctaccgaactggcccggctcgaactg
ctgatcgcggatgactgcgccagcgtgcgcgaggcactggccgttgtcgccaactccctg
ggctggctggccgataccgccgcttccggcgaggctgccctgatgcaagcgctaaccagg
ctgaacggcaaacgtttttacgatgctatcgtgttggattggaaaatgccggggctgggc
ggactgaatgccgccaaggccatacggcaagcgttgaaggacaaacgccgagacatcgac
ccgccgatactgctcatggtcgccgcccatttgcgcgaagacctattggcccaaccgggt
atcgcggaagtggccaaggtaatcagcaagccgattaccgcctcaacgctgtattccgcc
gtcgccgactcgctgcaccaagctgggccgggaggtttgctgccggccccgacgcctatc
gccgccggcaagcgccgcattccgggcgtacgcgtgctggtggtggacgatagcgacatt
aaccgggaagtagccaaaggcgtcctggaagcggatggcgcgctggtcgctacggcctgc
gacggccaggacgcgctggaatggctaaaagcccatcccgatgcggtggatatcgtattg
atggacctgcaaatgccgcgcctggacggctatgccgccacgcgctttatccgcgaggat
aaacgctggcgggagctacccatcgtcgcgctgaccgccggcgccttccaggaattgcgc
gatgcggcgcaggaatccggcatgagcgattttatcgccaagccattcaacgtggcgcag
atgatggaaaccatccagcgctggaccggatgcgtagccgagaagaccaattcggacgct
agcggcgcaagcgcaaccataggctcagcaagcgcatcgccgccggtgccggcggccggt
gctggcgaacccgagttgccggctatcgatctgccggccgcgcgcggcctatggggccag
ctcgacgtctaccgcacttatctggataaattcgtcgccgcttatgcgcagtgcggatcg
gccattgccgacgcctgcggcgaaggcgacctgaaagccgccgcggctctggcgcataaa
ttgagcggcttggccggaaccttacggctgcaccaggttgcggaattggcatgcaaacta
gaaatgcgcttgaatgcgggcgaagcgggctttaaactggcggcagacctgcaaaccgcg
atcgaccgggtatgtgcggcggtcgccgcctggcaacaagccgaccatcccggcgccgtg
ccggagccggttgccgcgccactcggggacagcttgcctacgttgttcgcgggcatgctg
gaagcgctggaccgtaacgatcccgatgccgccgaaatctggctgggccggctgcggcgg
cattcgaatcctatccatctggcggagttggacgcgctactggccgatttcgatttccgc
ggggcggaagctgccgtgcgtagcctgatgcagcgcctgaatttctcgataccggagtaa
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