Methylomonas sp. DH-1: AYM39_13730
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Entry
AYM39_13730 CDS
T04396
Name
(GenBank) Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdh03000
]
AYM39_13730
Transcription factors [BR:
mdh03000
]
Prokaryotic type
Helix-turn-helix
Other families
AYM39_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
PAS_8
HTH_8
GAF
PAS_4
AAA_16
PAS
AAA
PAS_9
AAA_2
Mg_chelatase
HTH_30
PAS_3
AAA_3
AAA_7
AAA_22
bpMoxR
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANE56135
UniProt:
A0A172U9Z9
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Position
complement(3101095..3102960)
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AA seq
621 aa
AA seq
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MHPVDSSEFSVLKAVVEGTAQATGGDFMRSLVRNLCQATGVANGFVAEFAEAKTRVRSLA
FWMDGDFLDRQEWDLPGTPCEEVLRGNFCHYPSGVSQLFPHEQGVESYLGVPLRDGAGEV
LGHLALFDRQPMPERDNLFYVFKIFASRAAAELNRLRIEQQLRLSEQRFRELFDEAPIAY
VHEDKDTRFLQANQAALRILGLTAEQVPSTQGISLVPNTPAAQARLREAFASVEKGTDSA
GVVLELRRKDDGRPVWIRWWSKTDPSGRFLRTMFIDITAQILMEQEQAKLQEQNRYLQEE
IKAEHNFEEIVGRSPALRSLLNQVQRVAQTDASVLIQGESGTGKELVARAIHSASKRKQR
PLIKVNCAALPASLIESELFGHEKGAFTGAINKRIGRFELAEGGTLFLDEVGEIPLEVQV
KLLRVIQEREFERVGGQTPIKMDVRVITATNRDLLQEVANKHFREDLFYRLNVFPLATPP
LRERLEDIPLLADFLIGKFAPKLGKKINGIGAESMRRLQRYHWPGNIRELENIIERAIIL
ADGPWLEIGAEQLPGSVTDISSVTLGNAAASLDAVARDHILQVLEQTRWVIEGPHGAAQR
LQIKPSTLRYRMRKLDIRKPG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcacccggtagattccagcgaattttcggttttaaaggcagtagtcgaaggtaccgcc
caagctaccggcggcgatttcatgcgctcgctggtgcgtaacctgtgccaggcgaccggc
gtggcgaacggttttgtcgccgagttcgccgaggccaagacccgggtgcgctccctggcg
ttctggatggacggcgattttctggaccgccaggaatgggacttgcccgggacgccgtgc
gaggaggtgttgcgcggcaatttctgccattacccctccggcgtctcgcagttgtttccg
cacgagcagggggtggaaagttatttgggggtaccgttacgggacggcgccggtgaggtg
ctcggccatctggcgctgttcgaccggcaaccgatgccggagcgggacaatctgttctat
gtcttcaaaatctttgcttcccgcgccgcggcggaattgaaccgcttgcgcatcgagcag
caactgcggctgagcgaacagcgttttcgcgaattgttcgacgaggcgccgattgcctat
gtgcacgaagacaaggacacccgttttctgcaggccaatcaggccgcgttgcggatattg
ggtttgaccgcagagcaggttcctagcacccaaggcatttcgctggtgccgaatacgccg
gcagcccaagcccgcttgcgggaagccttcgcctcggtcgagaaaggcaccgacagcgcc
ggcgtggtactggaattgcggcgtaaggacgacggccggccggtttggattcggtggtgg
tcgaaaaccgatcccagcggccggtttctaaggacgatgttcatcgacatcaccgcccaa
atcctgatggagcaggaacaggccaaattgcaggagcaaaaccgttacctgcaggaagaa
attaaggccgagcacaatttcgaggaaatcgtcggccgcagcccggcgctgcgttcgttg
ctgaatcaggtccaacgcgtggcacaaaccgatgcttcggtgctgattcaaggcgaatcc
ggcaccggcaaggaattggtcgcccgtgccatccactccgccagcaagcgcaagcagcgg
ccgctgatcaaagtcaattgcgcggcgttaccagccagcctgatcgaaagcgaattgttc
ggtcacgaaaagggcgccttcaccggggcgatcaacaaacgcatcggccgtttcgaactg
gccgaaggcggcacgctgtttctcgacgaagtcggcgagattccgttggaggtgcaagtc
aaattattgcgggtcatccaggagcgcgaattcgaacgggtcggcggtcagacgccgatc
aaaatggacgtgcgggtcatcactgcgaccaaccgcgatttgctgcaggaggtggcgaac
aaacatttccgggaagatctgttctaccgcttgaacgtatttccgctggctacgccgccg
ttgcgggagcggctggaagacattccgctgctggccgatttcctgatcggcaaattcgcc
ccgaaactcggcaagaaaatcaacggcatcggcgccgaatcgatgcggcgcttgcagcgt
taccattggccgggcaacatccgcgaactggaaaacatcatcgaacgcgcgattattctg
gccgatgggccatggctggagatcggcgccgagcaattgccgggcagcgtcacggatatt
tcatccgtgacgcttggaaacgctgccgccagcctggatgcggtcgcccgcgaccatatc
ctgcaggtgctggagcaaacccgttgggtcatagaaggcccgcacggggcggcgcagcgc
ttgcagatcaaacccagcactttgcgctatcggatgcggaaactggatattcgtaagccg
ggctaa
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