Methylomonas sp. DH-1: AYM39_14165
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Entry
AYM39_14165 CDS
T04396
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdh03021
]
AYM39_14165
Transcription machinery [BR:
mdh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AYM39_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANE57766
UniProt:
A0A172UEK7
LinkDB
All DBs
Position
complement(3204279..3207044)
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AA seq
921 aa
AA seq
DB search
MNEFIPGQRWISNTESELGLGMVVEAEANRVTVLFLATGDRRVYAKDNAPLTRVQFSAGD
VIESVEYAKITVQQVQQHAGLLTYIGLDENGRLQQIDEMELNHHIQFNKPQDRLFAGQFD
PTAWFLLRYETWRRQQQHQQSAVKGLQGARAALIPHQLYIAHQAANRAEPRIMLADEVGL
GKTIEAGLIIQHRLINGLSQRVLILVPESLMYQWLVEMLRRFNLRFSLFDESRCMSFADE
GNPFQHEQLILCSQQFFADFPERREQALEAGWDLVVVDEAHHLEWSAEAPSEEYLFVEQL
AAAAPGLVLLTATPEQLGKESHFARLRLLDPDRFYDFKQFLVEEGQFEPVARLANLLIAG
EMLDGEQQALLQRLLQHDNVDNWLREVNAAEGSAREELIKLLLDHHGTGRILYRNSRHTV
QGFPDRQRHAYPLQGEDGADLANSPYLHWLVGQLKALGDEKALLICKRAETAIQLEQLLR
HHVGHMAAVFHEGMSIVERDRAAAFFADEESRAQLLVCSEIGSEGRNFQFVRHLILFDLP
ENPDLLQQRIGRLDRIGQKHVIQIHIPYLVGSGQHVLYRWYEEGLDAFRHNCSGAAQVLK
LLGSELHEVLRARDPAAIEVLIAKTRDLNSRVEAELHKGRDLLLELNSCRPQEAAQLVEQ
IRRNELDGSLWPYMEEMFDCYGVDVEDHSRDCYILWPSENLRIAHFPMLQDDGLTVTVDR
DIALAREDMQFLTAEHPMVLSAMDLVLSSETGNAAVSVVKHPQLKAGQFLLELLFVAECS
APAELQLGRFLPHTPIRVLVDQNKKDLTAVVGHDSLTETGDSFDKLQIAQFLHSQRQHIQ
DMIQVAERLAAAQMQRLVTESGNRMIAALTGEIKRLVRLKKINPGIKPQEIEQLKQQTML
SHECIQDTQLRLDALRFVITS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatttattcccggccaacgctggatcagcaataccgaatccgaattgggtttg
ggcatggtagtcgaagccgaagccaaccgcgtcaccgtcttgtttttagcgaccggcgac
cggcgggtttacgccaaggacaatgcgccgttgacgcgggtacagttcagcgccggcgac
gttatcgagtcggtggagtacgccaaaatcactgtgcagcaggtacagcaacacgccggc
ctgttgacctatatcggcttggatgaaaacggccggttacagcaaatcgacgaaatggaa
ttgaatcaccatattcaattcaacaagccgcaagaccgtttgtttgccggccagttcgac
ccgaccgcttggtttttgttgcgctacgagacctggcgccggcaacagcaacaccagcaa
tccgcggttaaaggcctgcagggcgcgcgtgcggcgctgattccgcaccagttgtacatt
gcccaccaagctgccaatcgcgccgaaccgcgcatcatgctggccgacgaagtcggtttg
ggcaaaaccatcgaagccggcttgatcattcaacaccgcttgatcaacggcctgagccag
cgggttttgattctggtaccggaaagtttgatgtaccagtggttggtggaaatgttgcgc
cgttttaatttgcgcttcagcctgttcgacgagtcgcgctgcatgtcgtttgccgacgag
ggcaatccgtttcaacacgaacaattgattctgtgcagccaacagttcttcgccgatttt
ccggagcggcgcgagcaggcgctcgaggccggctgggatttggtcgtggtcgacgaggct
caccatttggaatggagcgcggaggcgccgagcgaggaatatttattcgtcgaacaactg
gccgccgcggcaccgggtttggtgttattgaccgccaccccggagcaattgggcaaggaa
agccattttgcccgcctgcgcttattggacccggaccgcttttacgatttcaagcaattc
ctggtggaggaaggccaattcgagccggttgcccgcctggcgaatctgttaatcgccggc
gaaatgcttgacggcgagcaacaagcgttgttgcaacgtttgttgcagcacgacaatgtc
gacaattggttgcgcgaggttaatgccgccgaaggcagcgcccgagaggaattgatcaaa
ttgttgctggaccatcatggcaccggtcggattctataccgcaattcgcggcataccgtg
cagggatttccggaccggcaacgccatgcctatcccttgcagggcgaggacggcgccgat
ttggccaatagcccgtatttgcactggctggtcggccaattaaaagcactgggcgacgaa
aaagccctgctgatttgtaagcgggccgagaccgcgatccaattggaacagttgctccgc
caccatgtcggccatatggctgcagtgttccacgaaggcatgagcatcgtcgaacgcgac
cgcgccgcggcgttttttgccgacgaagagagcagggcacaattgctggtctgctctgaa
atcggcagtgaaggccgcaatttccaatttgtccgccatttgatcttattcgacttgccg
gaaaatccggacttattgcagcaacgcattggccggctggatcggatcgggcagaagcat
gtgattcagattcatatcccgtatctggtcggcagcggccagcatgtgctctaccggtgg
tacgaagaaggtttggatgcgttcaggcacaactgttctggcgcggcgcaagtgctgaaa
ttgctcggcagcgaactgcatgaggtattgcgcgcgcgcgatccggcggcaatcgaggtg
ttgatcgccaagacccgcgacttgaacagtcgggttgaagcagaattgcacaaaggccgc
gatttattgctggagctgaattcctgccggccgcaggaggcggcgcagttggtggagcag
atccgccgcaacgagctggacggcagtctgtggccttacatggaggagatgttcgattgt
tacggggtcgatgtcgaggaccattcccgcgattgttatatcttgtggcccagcgaaaac
ctgcgcatcgcccattttccgatgttgcaggacgacggcctgacggtgacggtggatcgg
gatattgccttggcgcgcgaggacatgcagtttctgacggccgagcatccaatggtgctg
tcggcaatggacttggtcttgtccagcgaaaccggcaacgccgcagtcagcgtggtcaaa
catccgcagttgaaagccggccaattcctgctggagctattgttcgtcgccgaatgtagc
gcaccggcagaactgcaattaggccggtttttgccgcacactccaatccgcgtcctggtc
gaccaaaacaagaaagatctgacggccgttgtcggccacgatagcttgaccgagaccgga
gacagcttcgataaactgcagatcgcccagtttttgcatagccagcgccagcacattcag
gacatgatccaggtggccgaacgcttggccgcggcgcagatgcaaaggttggtgaccgag
agcggcaaccggatgattgcggcgttgaccggcgagatcaagcggttggtacgcttgaaa
aaaatcaatccgggcatcaaaccgcaagaaatcgaacaactgaaacagcaaacgatgctg
tctcacgaatgcatccaggatacccagttacggttggatgcgctgcgtttcgtgattacc
agttag
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