Methylomonas sp. DH-1: AYM39_14700
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Entry
AYM39_14700 CDS
T04396
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_14700
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYM39_14700
Archaeal homologous recombinant proteins
AYM39_14700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
ABC_tran
DUF496
DUF4922
Motif
Other DBs
NCBI-ProteinID:
ANE56307
LinkDB
All DBs
Position
complement(3320016..3323462)
Genome browser
AA seq
1148 aa
AA seq
DB search
MRILNINFKNINSLEGEGRIDFDQGPIADSGVFAITGPNGSGKTSILDVITLGLYGETFR
LDKPAEHVMTKQTNDSLAQVEFMLGDARFRSSWRVERIGDSALQPFMALTRLDGEQQEVL
ADTPNSVRARIAELTGMDFHKFSKSMVLPQGDFAAFMNALDSERMDILEKISGTDIYLEY
RQQTEANYQSARAGLAQLQQDIELIPVLSPQAVEAAEHDLQDFKQQVDELKAQHQSVDKQ
LRDVKNVQVLQNRQIQLTSQLRQIDDQIQQLQLALQEVAGLQDAAQFREELNALDAKQIQ
LEQSQASLAAYRQELEMLRRQLGEEVASVAAFEMDGKSVETQKQAIDTLKLKISDLKLLL
PSESEQAQALESQLAEKKTALAEVEAWLQQQSRDALLLSDFPDIPRLRNLRAELAELSGK
QKNQASWTKTTTTSLQKNKSALSATKADISELEIKVDDARKVMGELAQGKSFDELKELAA
EQQVRVNDFRELLSIADVNAKFSKKGFFHWFSGSGKQIDLPETDQLKARLDELREELSRE
DNIGKALEQAVANEALLKRFAGERGKLVEGQPCYLCGSLHHPYSTKPPAQTNAKKALVDQ
RGKMQALKATIETLSAQLAAAEKRGAQVSAREQRLQQMRSDWQVLINRLNVFSPELTIDN
LSLQKRLLANETEELEKIKNLLEQYAQLQRNVAKWLADIEGKKLALQKLAVSVGQLEEAW
NNRPSEFVEVEQRFTGLKAEEKALLEKLEQQLQQLGEKLPAKGKENLLFDKLNARRQDYQ
IRDMRKNGLSEEISDLQEKLRAAQAKIIEYQNKLSDYATGLQSEESVGLHLAVVEKQKLI
VECEKMLSAQQIEFEAMYRLLAGKLVGSDFADVDDLRAALTLIDNRQQIEAALEYQDGLR
ASVAQSLDKLSDELQREAAALAMLAYTDEESMLISLQRLAGQIEIAEQEVQTVENKLDKQ
QAYREKLQALQVRLSEQLALYSQAEAEMKLIADEPGGLRRRIQQLLVDKLMSKANQILEK
LSGRYYVRSTVNDHGLALEIEDTKQRNLHRLPKTLSGGESFVVSLALALALAEIANNGKA
IDSLFLDEGFGNLDAEALYLAMSALEGLSTQGKTVGVISHVDAVKKRIKTQIELVKKANG
LSELKMVA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcaatatcaacttcaaaaacatcaattccctcgagggcgaaggccggatc
gattttgaccaaggacctattgccgatagcggcgtgtttgcgatcaccgggccgaacggt
tccggcaaaaccagtattctcgacgtgattacgctaggactatacggcgagacttttcgc
ttggataagccggccgagcacgtgatgaccaagcaaactaacgatagtctggcgcaagtc
gaattcatgctcggggatgcacgatttcgttccagttggcgtgtggaacgcatcggcgat
tccgcgttacagcctttcatggccctaacccggttagatggagagcagcaggaggtcttg
gccgacacgccgaattcggtcagggcacgtattgctgaattaaccggcatggattttcat
aagttcagtaagtccatggtattaccgcaaggcgattttgctgcatttatgaatgcgctg
gatagcgagcgcatggacattctggaaaaaatcagcggtacggatatctacctggagtat
cggcagcaaactgaagccaattaccaatcggcccgtgccggcttagcccaattgcagcag
gatattgaattgattccggtgttgagtccgcaggctgttgaagctgccgaacacgacttg
caggatttcaagcaacaggtggacgagttgaaggctcagcaccagtcggtcgacaagcaa
ttgcgtgacgtgaaaaatgtccaggttttgcaaaatcggcaaattcaattaacaagccaa
ctgcgccaaatcgatgaccagatacagcaactgcagttggctttgcaggaagttgccggc
ttgcaggatgcggcccagtttcgcgaagaactgaatgcgttggatgcgaaacaaatccag
ctcgaacaaagccaagccagtcttgcggcctatcgccaggagctagaaatgctgcggcgg
caattgggggaagaggttgcgagcgtcgcggctttcgagatggatggcaagtccgtggaa
acgcaaaagcaggctatcgatacgctgaaattgaagattagcgacttgaaattacttttg
cccagcgaatcggagcaggcgcaggcgctggagtcgcaactggctgaaaagaaaaccgcg
ttggcggaagtcgaagcttggctgcaacagcagagtcgcgatgcgctactgctcagcgat
tttccggatattccacgcttgcgcaatctgcgtgcggagctggcggaattgtccggtaag
cagaagaaccaagccagttggaccaagaccactacgacgtctttgcaaaagaataagtcg
gcattgagcgccaccaaagcagatatctctgaattggaaatcaaggtcgacgatgcgcgt
aaagttatgggcgaacttgcgcagggcaaaagtttcgatgagctgaaagaattggcggcg
gagcagcaggtaagggttaacgattttcgggagctattgtcgattgccgacgtcaacgcc
aagttcagcaaaaagggtttttttcattggttttcaggaagtggtaaacaaatagatttg
cccgaaaccgatcagttaaaggcgcgtttggacgaactgcgcgaagagttaagccgggaa
gacaatatcgggaaagcgttggagcaggcggttgccaacgaggcgctgttgaagaggttt
gccggcgagcgcggcaagctggtggaggggcagccgtgttatttatgcgggtcgttgcat
cacccgtattcgaccaaaccgccggcgcagactaacgcaaaaaaagctttggtcgaccag
cgcggcaagatgcaggcattaaaagccacgatcgaaacattgtccgcgcaactggcggcg
gcggaaaagcgcggggcgcaggtctctgcccgcgagcagcgcttgcagcaaatgcgctcc
gattggcaggtgctgattaatcggctgaatgtgtttagcccggaactaacgatcgataat
ctttcgttgcagaaacgtttgctggctaacgagactgaggaattggagaaaataaagaat
ttgctggagcaatatgcccaattacagcgcaatgtggcgaaatggttggctgacatcgaa
ggcaaaaaactggctttgcaaaaactggccgtgtctgtcgggcaattggaagaggcctgg
aataatcgaccctccgaatttgtggaggtcgaacaacgttttaccggtctgaaagccgag
gaaaaagcgttactcgagaaattggagcagcaacttcaacaactgggcgagaagttgccg
gcaaaaggtaaggaaaacttgctgttcgataaactcaatgcccggcgtcaggattatcag
atcagggatatgcgaaaaaatggtttgtctgaggaaatatccgacttacaggaaaagttg
cgggcggcgcaggcgaaaatcatcgagtaccaaaacaagctttccgactatgcaacagga
ttgcagagtgaagagtccgtgggtctgcatttggcggtagttgaaaagcaaaaattgatc
gttgagtgcgaaaagatgttgtcggcgcaacaaattgagttcgaggcgatgtaccgcttg
ctggccggcaagttggttggcagtgactttgccgacgtcgacgatttacgtgccgctttg
acgctaatcgataaccgccagcaaatcgaagcggcgttggagtatcaggacggcctcaga
gcgtcggtcgcgcaatcgttggataagctaagcgatgagttgcagcgggaagccgccgcg
ttagcgatgttggcctataccgacgaagagagcatgttgatctcattgcagcggttggca
ggccaaattgaaatcgctgaacaggaagtccaaactgttgaaaacaaactggataaacag
caagcctatagggagaaactccaggcattacaagttcggttgagcgaacaactggcgctg
tacagtcaggctgaagcggaaatgaaattgattgccgacgaaccgggcgggttgcgcagg
cgcattcaacaattgttggtcgacaagttgatgtccaaggccaatcagattttggagaaa
ctcagcggccgatattacgtccgcagcacagtaaacgaccatggtttggcgttggaaatc
gaggataccaagcagagaaacctgcaccgcttgccgaaaacgttatcgggcggcgaaagt
ttcgtcgtcagtttggcgttggcgttggcgttggcggaaattgccaataacggcaaggct
atcgattccttatttttggacgaaggctttggcaatctggatgccgaggcgctgtatttg
gcaatgagcgcgctggaagggttgtccacccaaggcaagacagttggggtgatctcccat
gtcgatgccgtgaaaaaacgcattaaaacgcaaatagagttggtgaaaaaagccaacggg
ttgagcgaattgaagatggtggcttaa
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