Methylomonas sp. DH-1: AYM39_15730
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Entry
AYM39_15730 CDS
T04396
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03030
DNA replication
mdh03430
Mismatch repair
mdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM39_15730
03430 Mismatch repair
AYM39_15730
03440 Homologous recombination
AYM39_15730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdh03032
]
AYM39_15730
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_15730
Enzymes [BR:
mdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM39_15730
DNA replication proteins [BR:
mdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYM39_15730
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYM39_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
CRISPR_assoc
DNA_pol_B_thumb
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
ANE56482
UniProt:
A0A172UB82
LinkDB
All DBs
Position
complement(3547288..3548301)
Genome browser
AA seq
337 aa
AA seq
DB search
MRLKVEQLAAALQKAVAPVYLVSGDEPLQLGEAADDIRKAARAAGYTTREVISVESGHEW
PQLGLEADSLSIFSDKKLIDLRLPSAKPGTEGSKALIAYCQRLPEDTVLLVTAGKLESAA
QKSQWFQAVDGVGVIVQVWPLQGQELRQWLQRRAERKGMRLDQDALKSLAVRVEGNLLAA
AQEIEKLYILHGATLVGKAMVEDDVADSARFDVFKLTEALLAGKLNRALKILNGLRAEGT
ASSIVLWALSRETRMLLHVKSELGRGGNPDAVFKKYQVWDKRKHLVQEAVQRLKTEQLQA
ILRAGAEIDRSIKGQSAGDEWEGLFGLCVRFSGMAGL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttgaaagtcgagcagttggccgcggcgttgcaaaaagccgtggctcctgtctat
ctggtcagcggcgacgagcctttgcagttgggcgaagccgccgacgacatccgtaaggca
gcgcgagcggccggctacaccacccgcgaagtgatttcggtcgagtccggccacgaatgg
ccgcaacttggcctggaagccgattcgctgtcgattttttccgacaaaaaattaatcgat
ttgcgcctgccttcggcgaagccgggaacggaaggcagcaaagccctgatcgcctattgc
cagcgtttaccggaagataccgtgttgcttgtgacggcgggcaaactagagtcagcggcg
caaaagtcgcagtggtttcaggctgtggacggcgttggcgtcatcgtccaggtttggcca
ttgcaagggcaggaattgcggcagtggttgcaacgccgcgccgagcgcaaaggcatgcgg
ctggaccaagatgccttgaaaagtttggcggtccgggtcgagggcaatctgttggcggcc
gcacaggagatcgaaaagctttatatcctgcacggtgcgaccttggtcggcaaagccatg
gtcgaggacgacgttgccgacagcgcccgtttcgacgtgttcaaattgaccgaggccttg
ctggccggaaaattgaaccgagcgttaaaaatactgaatggcttacgggccgaaggaacc
gccagttccatcgtgttgtgggcgctgagccgggaaaccaggatgttgctgcacgtcaaa
agcgagttaggccgcggcggcaacccggacgcggtgtttaagaaatatcaggtttgggat
aaacgcaagcatctggtgcaagaagccgtccagcgtttgaaaaccgagcagttgcaagcg
attctgcgggccggggcggaaatcgaccgcagtataaaggggcaatccgccggggacgag
tgggaaggtttgttcggtttgtgtgtgcggttttcgggaatggcggggctgtga
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