Methylomonas sp. DH-1: AYM39_18040
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Entry
AYM39_18040 CDS
T04396
Name
(GenBank) two-component system response regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYM39_18040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mdh02022
]
AYM39_18040
02035 Bacterial motility proteins [BR:
mdh02035
]
AYM39_18040
Two-component system [BR:
mdh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AYM39_18040
Bacterial motility proteins [BR:
mdh02035
]
Pilus system
Twitching motility proteins
AYM39_18040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_30
AAA_19
HTH_50
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ANE56886
LinkDB
All DBs
Position
complement(4046427..4047767)
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AA seq
446 aa
AA seq
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MNMPVTLVVDDEPDIRELLEITLNRMQIQTRSAATLAEAKHCLANQSFDLCLTDMRLPDG
DGLELVDYIQAQGLTLPVAVITAHGSMDIAIKAMKKGAFDFLSKPVDLAVLRQLVSHALQ
ISLNRVAEKERRTRDLLLGESAPMRNIRSKIDKVARNQAPVYISGESGSGKELVARLIHQ
QSPRSEKAFIAINCGAIPHELMESEFFGHKKGSFTGAVSDKQGLFQAADGGTLFLDEVAD
LPLALQVKLLRAIQEKKIRPIGEQREIPVDVRLLSATHRDLAKMVQEGSFRQDLYYRINV
IELNLPPLRARAADIPQLTEHLLQGLARANGIAIPRLSDAALNALKQYYFPGNVRELENI
LERALALHEGGVIEVDDLNLPTGLDLAAAEDFDAEKMSLESYLEDIEKKALSSALEENRW
NKTATAKYLGMSFRSLRYRLKKLGLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcctgttacgttagtggtcgacgacgaacccgatattcgggaactgttggaa
atcacgttaaaccggatgcagatccagacccgtagcgcggctacgttagccgaagccaag
cactgtctggctaaccaatccttcgatttatgcttgaccgacatgcgcttgccggacgga
gacggcttggaactggtcgattacatccaggcccaaggtttgacactgccggtggcggta
atcaccgcccatggcagcatggatatcgcgatcaaggccatgaaaaaaggcgcgttcgat
tttctgtccaagccggtcgatctggcggtgttaaggcaattggtcagccatgccttgcag
atctcgctgaaccgggtggccgaaaaggaacgccgcacccgcgatttgttgctcggggaa
tcggcgccgatgcgcaatatccgctccaagatcgataaagtggcgcgcaaccaggcgccg
gtttacatcagcggcgagtcgggttccggcaaggaattggtggcgcggctgatccaccag
caaagcccgcgcagcgaaaaggcttttatcgccatcaattgcggcgcgattccgcacgaa
ttgatggaaagcgaatttttcggccacaaaaaaggcagcttcaccggggcggtcagcgat
aagcaaggtttgtttcaagccgcggacggcggcacgctgtttctggacgaagtggcagat
ttgccgttggctttgcaagtcaaattgctgcgggcgatacaggaaaagaaaatccgtccg
atcggcgagcagcgcgaaattccggtggacgtgcgtttgctgagcgcaacccacagggat
ttggccaaaatggttcaggaaggcagttttcggcaggacttgtattaccggatcaacgtc
atcgaattgaatctgccgccattacgggcgcgagccgccgatattccgcaattgaccgaa
catctgctgcaaggtttggcgcgggccaacggtattgctatcccgcgcctgtcggatgcg
gcgttgaatgcgctgaaacagtattattttccgggcaacgtccgcgagttggaaaatatt
ttggagcgggctttggcgctgcacgagggcggcgtgatcgaggtcgacgatttgaatttg
ccgacgggtttggacttggccgcggcggaagatttcgatgccgaaaaaatgtcgctggaa
agttatctggaagatatcgagaaaaaagcgctgagttcggctttggaggaaaaccgctgg
aataaaaccgcgacggctaaatatttgggcatgagtttccgctcgttgcgttaccggttg
aagaaactcggtctggaataa
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