Methylomonas sp. DH-1: AYM39_18270
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Entry
AYM39_18270 CDS
T04396
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00550
Peptidoglycan biosynthesis
mdh01100
Metabolic pathways
mdh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYM39_18270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AYM39_18270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
AYM39_18270
Enzymes [BR:
mdh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AYM39_18270
Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AYM39_18270
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ANE56929
UniProt:
A0A172UC76
LinkDB
All DBs
Position
complement(4098581..4100431)
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AA seq
616 aa
AA seq
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MDRKFAIKDPLAESRLFLSRIVAAFILILFLIVGLVVRLVYLQVVGHEHYATLSKDNRIK
ISPLPPTRGVIYDRKGRMLAENVPTYSLELIPEQIADLDDTLKRLQQLLNISEEKIDAFQ
KLRKRNKSFTTTPLLQNLTDEDVAKFAVVRPYFPGVDVYARLVRHYPYADLAAHVVGYVG
RISEDELKKLPLEQYRGTDQIGKIGIEKYYESHLLGTAGYEEIETNAQSRALRTVSTVEP
VAGSNIYLTLDIDLQKIAYDALHEYNGAAVAIEIKTGGVLVFASRPGFDPNPFVSGISAK
DYKALKDSEDQPLYNRALRGLYPPGSTMKPFYALAGLEYGVIDYGHRLFCPGYYKLPNVD
HKYRDWKKWGHGMVDMNEAITESCDVYFYDLAMALGIDKMSGFMHKFGFGEKSGIDLVGE
VDGLMPSKEWKRRYRNQVWFPGETVITGIGQGYTQVTPLQLARATATLANYGKVVNPHLV
QEIITPDYAAPPELRIVPDIPLKPANVDNILRSMTNVVHSPRGTAKLIAKNINYQIAGKT
GTAQVFTVKQEEKYNEDAVDFKMRDHALFIALAPVHDPQIAVAVIAEHGGHGGSVAAPIA
AEIIDAYLNQTKDAAP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaattcgcgatcaaggacccgttggcggaaagtcgcctgtttttgagccgc
atcgtcgcggcttttattttgatattgttcctgatcgtcggcttggtggtgcgcctggtt
tacctgcaagtggtcggccacgagcattacgccacgctgtccaaagacaaccgcatcaaa
atttcgccgctgcccccgacccgcggcgtcatttacgaccgcaaaggccggatgttggcg
gagaacgtgccgacttacagcctggaattgatcccggaacagatcgccgacctggacgat
acgctgaagcgtttgcagcagttgctgaatatctccgaggaaaaaatcgatgccttccaa
aagttgcgcaagcgcaataaatcctttaccacgacgccgttactgcaaaatctgaccgac
gaggacgttgccaaatttgccgtggtgcggccgtattttcccggcgtcgacgtctacgcc
cgcctggtgcggcattacccttacgccgatctggccgcccacgtagtcggctacgtcggc
aggatcagcgaggacgagctgaaaaagttgccgctggaacagtaccgcggcaccgaccag
atcggcaaaatcggcatcgagaaatattacgaaagccatttgctgggaactgccggttac
gaggaaatcgaaaccaacgcccagtcccgagccttacgtaccgtatcgacggtggagccg
gtagccgggtccaacatttatttgacgctggacatcgatctgcaaaaaatcgcctacgac
gcgctgcacgaatacaacggcgccgcggtggcgatcgaaatcaagaccggcggggtgttg
gtatttgccagccggcccggcttcgacccgaatccgttcgtctccggcatttcggccaag
gattacaaggcgttgaaggattccgaagaccagcccttgtataaccgggctttgcgcggc
ttgtatccgccgggatcgacgatgaaaccgttttatgccttggccggcctggagtacggc
gtgatcgattacggccaccgcctgttttgccccggctattacaaattgcccaacgtcgac
cacaaataccgggattggaagaaatggggacacggcatggtcgacatgaacgaagcgatc
accgagtcctgcgacgtgtacttttacgatctggcgatggctttgggcatcgacaagatg
tccggcttcatgcataaattcggcttcggcgagaaaagcggtatcgatctggtcggagag
gtcgacggcttgatgccgtccaaggaatggaagcggcgttaccgcaaccaggtctggttt
cccggcgagacggtgattaccgggatcggccaaggctacacccaggtgaccccgctgcaa
ttggcgcgcgccaccgcgacgctggccaattacggcaaagtcgtcaacccgcacctggtg
caggaaatcatcacgccggattacgccgcgccgcccgaactgcgtatcgtccccgacatt
ccgttgaaaccggccaacgtcgacaacatcctccgctccatgaccaacgtggttcacagc
ccgcgcggcaccgcgaaattgatcgcaaaaaatatcaattaccagattgccggcaaaacc
ggaaccgcgcaggtgttcacggtcaagcaggaggagaaatacaacgaggatgcggtcgac
ttcaaaatgcgcgaccatgccttgtttatcgccttggcgccggtgcacgacccgcagatt
gccgtcgcggtgatcgccgagcatggcggccacggcggttccgtggccgcgcctatcgcc
gccgaaatcatcgacgcttaccttaaccaaaccaaggacgctgcgccatga
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