Methylomonas sp. DH-1: AYM39_18955
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Entry
AYM39_18955 CDS
T04396
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03030
DNA replication
mdh03430
Mismatch repair
mdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM39_18955
03430 Mismatch repair
AYM39_18955
03440 Homologous recombination
AYM39_18955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdh03032
]
AYM39_18955
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_18955
Enzymes [BR:
mdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM39_18955
DNA replication proteins [BR:
mdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYM39_18955
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYM39_18955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_30
AAA_16
AAA_19
AAA_14
Rad17
AAA_assoc_2
AAA_7
DUF3646
nSTAND3
PIF1
AAA_28
TsaE
SRP54
DUF815
AAA_24
Herpes_Helicase
AAA_2
SKI
NB-ARC
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ANE57048
UniProt:
A0A172UD13
LinkDB
All DBs
Position
complement(4250927..4252543)
Genome browser
AA seq
538 aa
AA seq
DB search
MAYQVLARKWRPSNFSQLVGQEHVSQSLIHALQHERLHHAYLFTGTRGVGKTTVARILAK
AINCENLQNFNPCGACAVCQAFEQGRFMDLIEVDAASRTKVEDTRDLLDNAQYAPNQGRY
KVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPHKIPVTVLSRCLQFNLKRLTP
EQIDRQMQFILGEENIAFESQALKMLARAADGSLRDGLSLLDQAIVYGSGTVTGDAVLGM
LGAVAQQPVDDILLALAAGEARQILAKIADVAQLTPDFAEILQQILRVLHRVAVLQQVPA
FVDHEFDKQLLGELAQRLTPEDVQLYYQIGLTGQRDLVLAPDPRSGFEMTLLRMLAFRPA
AAGRMPVTAVAAGTPVVPNMAPAGEPPARTAPVAETVAEPVVAPAVQPIAAADAGSRWRD
IIAALNLNGRTRELANNCVLDSIDDSSCRLLLDPGFHQVGSRAEENLRAALQHYYGKPLK
LVITQQAAAQMTPALEMQKAREDRQQAAVDNINADPNVQALKETFGARIVPGSIEPLN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaggttcttgccagaaaatggcgtcccagcaacttttctcagctcgtcgga
caggagcatgtcagccagtctttgatccacgctctgcagcacgaacgcttgcaccacgcc
tatttgtttaccggtacccgcggcgtcggcaaaaccacggtcgctaggatattggccaag
gctatcaactgcgaaaatctgcaaaacttcaatccctgcggcgcttgtgctgtgtgccag
gcattcgaacaaggccgatttatggacttgatcgaagtcgatgccgcctcccgcaccaaa
gtcgaagacacccgcgatctgctggataacgcccaatacgcgccgaaccagggccgctac
aaggtttatctgatcgacgaagtgcacatgctgtcaggtcacagcttcaatgcgctgctg
aaaacgctggaagagccgccgccccacgtcaagtttctgctggcgactaccgatccgcac
aagatcccggttaccgtgctatcgcgctgtctgcaattcaatctgaaacggctgactccc
gagcaaatcgaccggcagatgcaattcatcctcggcgaggaaaatatcgcattcgagtct
caggccctgaaaatgttggcgcgagcggccgacggcagtttgcgcgacggcttgagcttg
ctggatcaggcgatcgtctacggcagcggcacggtaaccggcgacgcggtgctgggcatg
ctcggcgcggtcgcccagcaaccggtcgacgatattttgttggccttggcggccggcgag
gctcgccagatcttggcaaagatcgccgacgtggcgcaactgacgccggacttcgccgag
attctgcagcagatattgcgggtattgcatcgggtagccgtattgcaacaggtgccggct
ttcgtcgaccacgaattcgacaagcagttgctgggcgagctggcgcagcggttaacgccg
gaggacgtgcagttgtactatcagattggcttgaccggccaacgcgacttggttttagcg
cccgatccgcgcagcggcttcgaaatgacgttattgcgcatgctggcttttcgcccggcg
gcggctggccgcatgccggtaacggctgttgcggctgggactcccgtcgtgccgaatatg
gcaccagccggcgagcccccggcgcggacagcgccggttgccgaaacggtggccgagccg
gtcgtagccccggcggtgcaaccgattgccgccgccgatgccggaagccgctggcgagat
attattgcggccttgaatctgaatggccgtactcgcgaattggccaataattgcgtgctg
gacagtatcgacgacagcagttgccggctattgctggatcccggctttcaccaagtcggc
agccgggccgaggaaaatctgcgcgcggccttgcaacattattacggtaagccgttgaaa
ttggtcattacccagcaggcggcggcacaaatgacgccggcactggaaatgcagaaagcc
cgggaagaccggcagcaggcggcggtggacaatatcaacgccgaccctaacgtacaggct
ttaaaagaaacgttcggagccagaattgtgcctggcagcatcgaaccgctgaattga
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