Methylomonas sp. DH-1: AYM39_19180
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Entry
AYM39_19180 CDS
T04396
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_19180
Enzymes [BR:
mdh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AYM39_19180
DNA repair and recombination proteins [BR:
mdh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AYM39_19180
Prokaryotic type
AYM39_19180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANE57084
UniProt:
A0A172UDA1
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All DBs
Position
complement(4305363..4306886)
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AA seq
507 aa
AA seq
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MSYHLVWFKRDLRVHDHAALWHASRQAPVLCLYIIEPSLWQAADASTQHYQFLRESLLDL
DRALRKRGGGLRIEVGEVVDVLDRIWHEAPFAALYSHQETGNWLSFQRDLAVQRWCRKRG
LPWHEFAQFGVVRRLPSRNHWQAHWEALMAAPCLEVPGCRWISAPSPLMLPEPQSFSLKQ
ADPPQRQRGGRRPAIATLRDFLFERSGRYRGGISSPLSAPSACSRLSAYLAFGCLSLREV
VQASRRQIDALPTCDARRAGLTAFVSRLYWHCHFIQKLESEPELEFRNMHRGYDGLREAD
WNPAHFQALSEGRSGWSLVDACVAMLNRTGWLNFRMRAMLVSVAAYPLWLHWQPVGTWLA
RQFLDYEPGIHWSQMQMQAGTTGINATRVYNPIKQARDHDPRGHFVRHWLPALSRVPQEW
LFEPWRMPTKLQQQCGVKVGVDIPEPPVDLETATRQAKARLYAIRSQPEVKAAKAASVEK
HGSRKRPMPRRPAKPIAGAWVQTELEC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacctggtctggttcaagcgcgatctgcgggtgcatgaccatgctgccttg
tggcacgccagccggcaagcgccggtgttgtgtctgtacataatcgagcccagcctgtgg
caggcggccgatgcctcgacccaacattaccaatttctgcgggaaagcctgctcgatctt
gatcgtgcgttgcgcaagcgcggcggcggtttgcgcatcgaagtcggcgaagtggtcgat
gttctggaccggatctggcacgaagccccgtttgcggcgctgtattcgcatcaggaaacc
ggcaactggctgagctttcaacgtgatctggcggtacagcgttggtgccggaaacgcggt
ttgccgtggcacgagtttgcccagttcggcgtggtgcggcgcctgccaagtaggaaccat
tggcaagcccattgggaagcactgatggcagccccgtgtcttgaggtgcccggctgccgc
tggatcagcgcgccttcacccttgatgttgcccgaaccgcaaagcttcagcctgaaacaa
gccgatccgccgcaacgccagcgcggcggccgccggccagccatagcaaccttgcgcgat
ttcttgttcgagcgcagcggccgttaccggggcggcatatcctcgccgctgtcggcgccg
agcgcttgctcgcgtttgtcggcgtatctggccttcggttgtttgagtctgcgtgaagtg
gtgcaagccagccgccgccagatcgatgctctgccaacctgcgatgcccgccgcgccggc
ctgaccgctttcgtcagccgcttgtattggcattgccatttcatccaaaaactggaaagc
gaaccggaactggaatttcgtaacatgcatcgcggctacgacggcttgcgcgaagcggat
tggaatccggcgcattttcaggcgctaagcgaaggccgcagcggctggtcgctggtcgat
gcctgcgtggccatgctgaaccgcaccggctggttaaatttccggatgcgagcgatgctg
gtgtcggtggccgcttatccgttgtggctgcattggcagccggtcgggacttggttggcc
cggcagtttctggattacgaacccggcattcattggagccagatgcagatgcaggccggt
accaccggcatcaacgccacccgcgtctataacccgatcaagcaggcccgcgaccacgat
ccgcgcggccattttgtcaggcattggctgccggctttaagccgagtgccgcaggaatgg
ctgttcgaaccctggcggatgccgacaaaattgcagcagcaatgcggagttaaagtcggc
gtcgatatccccgagccgccggtcgatctggaaaccgccacccgccaagccaaggctcgg
ctctatgcaatccgcagccagcccgaagtcaaagccgccaaggcggcgagtgtcgagaaa
cacggctcgcgcaagcggcccatgccgcgccggccggccaaacccatcgccggcgcttgg
gtacaaaccgagctggaatgctga
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