Methylomonas sp. DH-1: AYM39_19435
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Entry
AYM39_19435 CDS
T04396
Name
(GenBank) transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh02020
Two-component system
mdh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYM39_19435
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AYM39_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdh03000
]
AYM39_19435
Transcription factors [BR:
mdh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AYM39_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
MarR
TrmB
HTH_24
MarR_2
HTH_11
Major_capside
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ANE57135
LinkDB
All DBs
Position
complement(4362699..4363352)
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AA seq
217 aa
AA seq
DB search
MSFVKQNKISPAALDAFLRFCHVRSYPAKITIVRPGDIGDKLLFVVDGSVSVSVEDEEGR
ELILAYLNKHDFVGEIGVFKNAETRSVSVKTRTKCQMAEIGYERFKLLLNTDLRDHAVEI
LTVLGEQLSTRLLITSRKYRDLAFMDVEGRIARTLLDLCKEPDAITHPDGMQLHITRQEI
GRIVGCSREMAGRVLKELEDKGLITAHGKTIVVFGTR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgttaaacaaaataaaatatctcccgccgccctggatgcctttctgcgtttc
tgccacgttagaagttatccggccaaaataaccatcgttcgcccgggtgacatcggcgat
aaattgttgttcgttgtcgacggttcggtaagtgtgagcgttgaggacgaagaaggccgc
gaactgatattggcgtatttgaataagcacgatttcgtcggcgagatcggcgtgttcaaa
aacgccgaaacccgcagcgtatcggtaaaaacccggaccaaatgccagatggccgaaatc
ggctacgagcgtttcaagctgctgttgaacaccgacttgcgcgaccatgccgtggaaatt
ttgacggtactgggcgaacaactctcgacccggctgttgatcaccagccgcaaataccgc
gatttggcattcatggacgtggaaggccgcattgcccggacgttattggatttgtgcaag
gaaccggatgcgattacccatcccgacggcatgcaattgcatatcacccgccaggaaatc
ggccgtatcgtcggttgttcgcgggaaatggccggacgggtgttgaaggagctggaagac
aaaggcttgattaccgcgcacggcaaaaccatcgtcgtgttcggcacccgttaa
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