Methylomonas sp. DH-1: AYM39_19570
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Entry
AYM39_19570 CDS
T04396
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYM39_19570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_19570
Enzymes [BR:
mdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYM39_19570
DNA repair and recombination proteins [BR:
mdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYM39_19570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
Zn_ribbon_6
AAA_25
HypA
AAA_19
Zot
Mtr2
DUF3638
DUF5817
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ANE57160
UniProt:
A0A172UCW8
LinkDB
All DBs
Position
complement(4402878..4405079)
Genome browser
AA seq
733 aa
AA seq
DB search
MSNCDVSGKLILKVATPVPLERIFDYLPPEGCDAADLRPGSRVLVPFGRRRQVGVLLAVA
SDSDVAVERLKPALAVLDPAPLLSETDLKLLHWAARYYHHPLGEVLAAAFPVALRQGRPA
VLELPKAYQLTSAGRQTDLQQLSRAPKQRALLARLQAGILAEADLADCRPALKALLDKGL
AERCELPPSAAVTEAEPALAANAEQQAAIASVAAGLGRFSVSLLEGVTGSGKTEVYMQVI
ASVLAQGKQVLVLLPEISLTPQLEQRFRRRFAVAMVATHSKLTDNQRLQAWLSMQQGRAA
IMLGTRSALFTPLQRPGLIILDEEHDSSFKQQEGFRFSARDVAVARAKMLDIPVLLGSAT
PSLESLANVGEGRYRLLHLPNRAGAAVAPSFQLLDIRNKRLQSGLSEPLLAEIRAALDNG
QQVLLFLNRRGYAPVQICHGCGWVSRCRRCDANLVIHAAERLLRCHHCGAEHPLIKLCPA
CSTGELQALGLGTERIEQTLAELFPQWSVVRLDKDTTQRKGALEGYLEQIHDGRADIILG
TQMLAKGHHFPGVTLVAILDIDSGLFSIDFHGAERLAQLIVQVAGRAGRAERPGRVILQT
RQPQHPLLNTLLRQGYRAFADSALQERRQAGLPPYSYQALFRAQAGGSDAPRRFLQAVCA
AIAELGAGSTQVLGPVAAPMARRAGAYRYQLLLQSPRRQDLHRLLDLVLPRIYLLPEVKK
VRWSLDVDPLDLY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactgtgacgtttccggcaaattaattctgaaagttgcaacccccgttccgtta
gaacgcattttcgattacctgcctccggaaggttgcgacgctgccgatttgcgtccgggc
agcagagtcctggtgccgttcggcaggcggcgccaggtcggcgtgctgttggcggtggca
tccgactccgatgtggccgtcgagcgtttgaaaccggcgcttgcggtgctggacccggcg
ccgctgttgtccgagaccgatctgaagctgctgcattgggctgcccgctattaccaccat
ccgctcggcgaagtgctggccgccgcgtttccggtcgcgttgcgccaaggccggccggcc
gtgttggagctgcccaaggcttaccagctgacttcggccggccggcaaaccgatttgcag
caattaagccgggcgccgaagcaacgggcattgcttgcgcgcttacaggccgggatcttg
gcggaggcggatctggccgactgccggccggcgttgaaggccttgttggacaaaggtctg
gccgaacgctgcgagctgccgccaagcgctgcggtaacggaagccgaaccggccttggcc
gccaacgccgagcagcaggcggcgatagccagcgtcgccgccgggctcggccggttttcg
gtgtcgctgttggagggcgtgaccggcagcggcaagaccgaggtgtatatgcaggtcatt
gccagcgtcctggcgcaaggcaaacaggtgttggtgctgctgccggaaatcagcctgacg
ccgcaattggaacagcgtttccgccgccgcttcgccgtggcaatggtggcgacccactcc
aaactcaccgacaaccagcgcctgcaagcctggttgagcatgcagcaagggcgggcggcg
atcatgctcggcacccgttccgcgttgttcacgccgttgcaacggccgggcctgatcatt
ctcgacgaagagcacgacagctccttcaagcagcaggagggcttccgcttctcggcgcgc
gacgtggccgtggcccgagccaagatgctggatattccggtgttgctgggttcggccacg
ccgtcgctggaaagtctggccaatgtcggcgaaggccgctaccgcctgctgcatttgccg
aaccgggccggcgcggcggtagcgccgagctttcaattgctggatatccgcaacaagcgc
ctgcaatccggcctgtccgaaccgttgttggcggaaatccgcgctgcattggacaacggg
cagcaggtattgctgttcctgaaccggcgcggttacgccccggtacaaatctgccacggt
tgcggctgggtgtcgcgttgccgccgctgcgacgccaatctggtgatccatgccgccgag
cgtctgttgcgctgccaccattgcggcgccgagcatccgttgatcaaactttgcccggct
tgtagcaccggcgaattgcaggcgctggggctcggcaccgaacgcatcgaacagaccctg
gccgaattgtttccgcagtggagcgtggtgcggctggacaaggacacgacgcaacgtaaa
ggcgcgttggaaggttatctggagcaaatccacgacggccgggccgacatcatcctcggc
acgcagatgctggccaagggccaccattttccgggcgtgacgctggtggcgattttggac
atcgacagcggcctgttcagcatcgattttcacggtgccgagcgcctggcgcagttgatc
gtgcaggtggccggccgcgccggccgggccgaacggccgggccgggtgattttgcagacc
cgccagccgcaacatccgttgctgaacacgttgttacggcaaggttaccgcgcctttgcc
gatagtgccttgcaggagcggcgccaggccggcttgccgccgtacagctatcaggccctg
tttcgggcgcaagccggcggcagcgatgcgccgcgccgatttctgcaagccgtttgcgcg
gcgattgccgagctgggcgccggcagcacccaagtcttggggccggtggcggcaccgatg
gcgcgccgcgccggcgcttaccgttaccaattgctgttgcaaagtccgcggcgccaggat
ctgcatcgcttgttggaccttgtgctgcctcggatttacctattgccggaggttaaaaaa
gtccgttggtcgctggacgtcgacccgctggatctgtactga
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