Methylomonas sp. DH-1: AYM39_19945
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Entry
AYM39_19945 CDS
T04396
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00470
D-Amino acid metabolism
mdh00550
Peptidoglycan biosynthesis
mdh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYM39_19945 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYM39_19945 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
AYM39_19945 (murD)
Enzymes [BR:
mdh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AYM39_19945 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
Precursor biosynthesis
Amino acid ligase
AYM39_19945 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
2-Hacid_dh_C
XdhC_C
NAD_binding_8
CbiA
Motif
Other DBs
NCBI-ProteinID:
ANE57224
UniProt:
A0A172UDP7
LinkDB
All DBs
Position
4490642..4492012
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AA seq
456 aa
AA seq
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MDTAQLLANLEHHFQLDPANARLLIVGLGATGYSAAQFLQKTPIKFAVVDSRKQPPLIDN
LREQMPDVPVFSGGFDQAALDVATHLLVSPGVSLHETAIHKAVQAGVVVISDIDLFACAT
DKPIIGITGSNGKSTVTTMLGEMANAAGVKTAIGGNLGTPALDLLQQDADLYVLELSSFQ
LERTRALNAKAATVLNVSPDHLDRHASIESYAAEKQRIFRGGGTMVLNADDALVMAMRDA
NRPTLTFSIQGPADFYLQRGETVNLMHGNQVLMPAAHLRLEGSHNLANALAALALGSAVG
LSMTAMCSALRNFKGLPHRMQKVAERAGINWINDSKATNIGACVAALQGYDRKVVLIAGG
DAKGADMAELAPAVREKTKGVVLIGKDAQVIADALQDCVPVRFAGTMKEAVKTAASLADA
GDSVLLSPACASLDQYRSYVDRGNKFAEAVMELPSC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcgcaactactcgccaatctcgaacaccatttccaactggatccggccaat
gcccggctgctgatcgtcggcctgggcgcgaccggttactcggccgcgcaatttttgcaa
aaaaccccgatcaaattcgccgtggtcgacagccgcaagcagccgccattgatcgacaac
ctgcgcgaacaaatgccggatgtaccggtattttccggcggcttcgaccaagccgcgctg
gatgtcgccacccacttgctggtcagccccggcgtatccttgcacgaaaccgcgatccat
aaagccgtgcaggccggagtcgtcgtgatcagcgacatcgatttattcgcctgcgccacc
gacaaaccgatcatcggcatcaccggttcgaacggcaaaagcaccgtcacgacgatgctg
ggcgaaatggccaatgccgccggggtgaaaaccgccatcggcggcaatctgggtacgcca
gcgctggacctgttgcaacaggatgccgatttatacgtgctggaactgtctagtttccaa
ttggagcgcacccgagctttgaacgccaaagccgcaaccgtgttgaacgtcagtccagac
catctggatcgccacgccagcatcgaaagctacgccgccgaaaaacagcgcatattccgc
ggcggcggcaccatggttttaaacgccgacgatgcgctggtgatggcgatgcgcgacgct
aatcgaccgacgttgacgttttcgatccaaggtcccgccgatttttatctacaacgcggc
gaaaccgtcaatctgatgcacggcaaccaagtcttgatgccggccgcccacctgcgcctg
gaaggttcgcacaatttggccaacgccctggctgccctggccttgggcagcgcggtcggt
ctgagcatgaccgcgatgtgctcggcgctgcgcaatttcaaaggcctgccgcaccggatg
cagaaagtcgccgaaagggccggcatcaactggatcaacgattccaaggccaccaacatc
ggcgcctgcgtcgctgcgttgcaaggctacgaccgtaaagtggtgctgatcgccggcggc
gacgccaaaggtgccgacatggccgaattggcgccggcagtgcgggaaaaaaccaaaggt
gtcgttctgatcggcaaggatgcgcaagtgattgccgatgcgctgcaggattgcgtgccg
gtcagattcgccggcaccatgaaagaagcggtcaaaaccgccgcaagcctggccgatgcc
ggcgacagcgtgctgttgtcgccggcctgcgcgagcttggaccaataccgcagttacgtc
gaccgcggcaacaaattcgccgaagcggtgatggagctgccgtcatgttga
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