Methylomonas sp. DH-1: AYM39_20390
Help
Entry
AYM39_20390 CDS
T04396
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdh02000
]
AYM39_20390
Transporters [BR:
mdh02000
]
Other transporters
Pores ion channels [TC:
1
]
AYM39_20390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ANE57305
LinkDB
All DBs
Position
complement(4592675..4595218)
Genome browser
AA seq
847 aa
AA seq
DB search
MKPLRLRRSRKRAAATLCLGLSAAAALQPSLAEPAAANSAAVYRFDIAAQPLYAALSQLA
EQTGIQFVYSPDLVKSLQAPALSGSMTADQALQKLLAGSGLAHKAGQGNSVILEKTAVNE
PQSAPGSTTLPSVTVVGKASGFDDNDPRSREYAESHSAAATKTDTPIFDTAASIQVVPRA
VMEDQKNTRIKDALENVSGVRAQPTLGMGTGFIVRGFKVDHVFRNGLITTQSNGFNSEFD
IANLESVEILKGPSAMLYGRSEPGGLINVTTKKPSETPFYSLEQQFGSYDYYRTQWDATG
PLNGDKTLLYRFSGSYQDNNSFRDLIFTDRVSVSPSITWKPSDATDFTLNVEGLKQDYQA
DFGIPAIGNRPANIPIGNSFGDTNDPVDHLSKVHLGTEFNHRFNQDWAIHNRFLMSRENN
EQVFVNPSPAFGNALLADNRTLGRNIFSQENEVEAYTTNLDLTGKFKLLGMQHDALVGFD
YTQSHTMYHTQGDWQNRNPALDIDIYNPRASYGIPSSVFDSTLATYVQPGREYSMFVTEW
YGAYFQDHITLWDKLHIYGGGRYDWAEVGRGRGTTEAVAENALEYSNPSVKRKDEAFSPR
VGILYQPWRWLSVYGSWSNSFGANNGVSAAGQALAPETGEQFEAGVKTQLFDDRLLATLA
YYHLTKNNIMTADLSTPDPTDNAAIGQARSQGIELDVSGRLSDNFSIIGSYAYTDARITK
NNDGYEGTRLPNVAEHSGSLWLRFDANGYQAAEGFSMGVGGVLAGKREGNYAYYGSPFQL
PGYVRVDAFAAYKWNVHKFPVTAQFNIRNLLDKTYYESTDPDANVSPRNGIYPGAPLMAI
GSIKVEF
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcttcgtctccgccgcagccgtaaacgcgccgccgccacgttatgcctgggc
ctcagcgccgcggcagcgcttcaacccagtctggccgagccggcagcggccaattccgcc
gcggtttaccgattcgatatcgccgcacagccgctgtatgcggctttgagtcaactggcc
gagcaaaccggaatccagttcgtttactcgccggacctggtcaagagtttgcaggcgccg
gcgttgtccggcagcatgaccgccgaccaagccttacaaaagttattggccggtagcgga
ttagcgcacaaggccggccagggcaattcggtaattctggaaaaaacggcggtgaacgag
ccgcaatccgcgcccggctcgacgacgctacccagcgttaccgtggtcggtaaagcgtcc
ggcttcgacgataacgacccgcgcagccgggagtacgccgagtcgcatagcgctgccgcc
accaagaccgatacgccgattttcgataccgccgcctcgatccaggtggtgccgcgcgcg
gtgatggaggaccagaaaaacacccggatcaaggatgcgctggaaaacgtcagcggcgtc
cgcgcccaacccacgctgggcatgggcaccggcttcatcgttcgcggctttaaagtggac
cacgtattccgcaacggcctgattacgacccaatccaacggctttaacagcgaattcgac
attgccaatctggaaagcgtcgagatcttgaaagggccgtcggcgatgctgtacggccgc
agcgaaccgggcggcctgatcaacgtcaccaccaaaaaaccgtcggaaacgccgttttat
tcgttggagcagcagttcggttcctacgactactaccggacgcaatgggacgccaccggc
ccgctgaatggcgacaaaaccttgttgtaccgcttctccggttcgtaccaggacaacaat
tcgttccgggatttgatctttaccgacagggtcagcgtgtcgccgagcatcacctggaaa
cccagcgacgcgaccgactttaccttgaatgtcgaagggttaaagcaggattaccaggcc
gatttcggcattcccgccatcggcaaccgcccggccaatattccgatcggcaacagtttc
ggcgacaccaacgatccggtggaccatttgagcaaggtccacttgggcaccgagttcaac
caccgcttcaaccaagattgggcgatccataaccgcttcctgatgagccgggaaaacaac
gaacaggtgttcgtcaacccgtcgccggccttcggtaacgccctgctggccgacaaccgc
acgctgggccgcaatattttctcgcaggaaaacgaagtcgaggcctataccaccaatctg
gatctgaccggtaaattcaaactgttggggatgcaacacgacgccttggtcggcttcgac
tacacccaatcgcataccatgtaccatacccagggcgactggcagaaccgcaatccggcg
ctggacatcgatatctacaacccgcgggccagttacggcatcccctcgtcggtattcgat
tcgaccttggctacttacgtgcagcccggccgcgaatactcgatgttcgtcaccgaatgg
tacggcgcctattttcaagaccacatcaccttgtgggacaagctgcatatctacggcggc
ggccgttacgactgggccgaagtcggccgtggccgcggcactaccgaagccgtcgcggaa
aatgcgctggaatattccaatccgtccgtcaaacgcaaggacgaagccttcagccccagg
gtcggcattctgtaccaaccctggcgctggctcagcgtttacggcagttggagcaattcg
ttcggcgccaataacggcgtcagcgccgccggccaggccttggcgccggaaaccggcgaa
caattcgaagccggggtcaaaacccagttgttcgacgaccgcttgttggcaacgctggcg
tattaccatctgaccaagaacaacatcatgaccgccgacctgagcacgccggacccgacc
gacaatgccgccatcggccaggcgcgcagccagggtatagagctcgacgtcagcggccgc
ttgagcgacaacttcagcatcatcggcagctacgcgtataccgatgcccgcatcaccaaa
aataacgacggttacgaaggtacccggctgcccaacgtcgctgaacattccggcagttta
tggctccgattcgacgccaacggttaccaggccgcggagggcttcagtatgggcgtcggc
ggcgtgctggccggcaagcgcgaaggcaattacgcctattacggcagcccgttccagttg
ccgggttacgtgcgggtcgacgcatttgccgcctacaaatggaacgtgcataaatttccg
gtcacggcccagttcaacatccgcaatttgttggacaaaacctattacgaatcgaccgat
ccggacgccaacgtctcgccgcgcaacggtatttatcccggcgcgccattgatggcgata
ggctcgatcaaggtcgagttctaa
DBGET
integrated database retrieval system
