Methylomonas sp. DH-1: AYM39_20675
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Entry
AYM39_20675 CDS
T04396
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYM39_20675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdh03400
]
AYM39_20675
Enzymes [BR:
mdh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AYM39_20675
DNA repair and recombination proteins [BR:
mdh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYM39_20675
Prokaryotic type
AYM39_20675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANE57351
UniProt:
A0A172UDF8
LinkDB
All DBs
Position
complement(4653412..4653960)
Genome browser
AA seq
182 aa
AA seq
DB search
MVGPVVCCQPVLSKVMLIGQAPGGKEGQFGKPFAWTAGKTLFGWFGRLGLSEEQVRQRLY
MAAVCRCFPGKQAGGGDRVPSPAEIDHCAAWLRAEIELLQPQLILPVGKLAIRQWLQADK
LSEVIGKQFRVEAYGHAADLIPLPHPSGASTWHRTEPGIGLLAEALAAIERHPAWQAIRP
ND
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggccggtggtttgttgccagccggtgttgtcgaaggtgatgctgataggccag
gcgccgggcggcaaggaaggccagttcggcaaaccgttcgcctggactgccggcaaaacc
ttgttcggctggttcggccggctggggctgagcgaagagcaggttcggcaacggctttac
atggcggcggtgtgccgttgcttccccggcaagcaggccggcggcggcgaccgggtgccg
agcccggccgaaatcgaccattgtgcggcgtggctgcgggccgaaatcgagctattgcaa
ccgcaattgatacttccggtcggcaaactggcgatccggcaatggttgcaggccgacaag
ctcagcgaggtgatcggcaagcaatttcgggtcgaggcctacggccacgccgccgacctg
attccgctgccgcacccgtccggcgcctcgacctggcaccggaccgagccgggtatcggt
ttgctggccgaggccctggcggcgatcgagcgccatccggcctggcaagctatccggcca
aacgattga
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