Methylomonas sp. DH-1: AYM39_20950
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Entry
AYM39_20950 CDS
T04396
Name
(GenBank) hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
mdh
Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdh01002
]
AYM39_20950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
AYM39_20950
Peptidases and inhibitors [BR:
mdh01002
]
Cysteine peptidases
Family C82
AYM39_20950
Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AYM39_20950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
DUF6117
His_Phos_1
Motif
Other DBs
NCBI-ProteinID:
ANE57401
LinkDB
All DBs
Position
complement(4720899..4721858)
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AA seq
319 aa
AA seq
DB search
MKIRLLTGLLLAVSGSVSALTLPAPDRPGESLIGNPPHEVKYVSAKQEDTLIDIAVNFRL
GQDQIVLANPYVDRWLPREGTQVRIPSSFILPNAPRQGIVINLPEMRIYYYPDSSKVVTY
AIGIGREDNWKTPLGKTHIAGKTENPSWTPPPSIIAEHLAEGDVLEPYYPPGPDNPLGLF
AFKLGIPGYLIHSTNKTNGVGMRVSHGCIRMYPADIEQFFPMVKVGTQVNIVNQPIKVGW
YRDTLYLEAYPDMEETPATFEQRLHAALDLIEQANGGKMPVIKGSVLKAAIEKSTGIPTA
IYERPAPTPPVVQSQVAPN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgtttattaaccggcctgttgttggctgtaagcggcagtgtctcggcattg
accttgccggcgccggatcggcccggcgagagcctgataggcaatccgccgcacgaggtc
aagtacgtatccgccaagcaggaagacacgctgatcgatattgcggtcaatttcaggctt
gggcaggatcaaatcgtgttggccaatccttatgtcgaccgctggttgccgcgcgaaggc
acccaggtgcggattcccagcagtttcattttgccgaatgcgccgcgccaaggcatcgtc
attaatttgccggagatgcggatttattattatccagattccagcaaagtggttacctat
gccatcggtatcggccgggaagacaattggaagacgccgctgggtaaaacccatatcgcc
ggcaaaaccgaaaacccgtcctggaccccgcccccgtccatcattgccgagcatttggcc
gaaggcgacgtgctggagccttattatccgccggggccggacaatccgttgggtttattc
gcatttaaattgggtatacccggctatctgatccacagtaccaacaaaactaacggtgtt
ggcatgcgcgtcagccatggttgcattcggatgtatccggctgacatcgagcagtttttc
ccgatggtcaaagtcggtactcaggtcaatatcgtcaaccagccgattaaggtcggttgg
tatcgcgatactttgtatcttgaggcctatccggatatggaagaaacgccggctacattc
gagcagcgtttgcatgcggcattagacttgatcgagcaagccaacggcggcaagatgccg
gtcatcaaaggatcggtgttgaaggcggcgatcgaaaagtctaccggtataccgaccgcg
atctacgagcgtccggcaccaactccgccggtcgtgcaaagccaagtcgcaccaaactag
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