Methylomonas sp. DH-1: AYM39_22300
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Entry
AYM39_22300 CDS
T04396
Name
(GenBank) hypothetical protein
Organism
mdh
Methylomonas sp. DH-1
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Transglut_core
Malic_M
Motif
Other DBs
NCBI-ProteinID:
ANE58015
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All DBs
Position
unnamed:complement(179937..185588)
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AA seq
1883 aa
AA seq
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MGFGVSAMAAPTDTGPAKWVLPAVAQAVVEPHVPAPAPTSPAGWVNQTAEPVSPEAAQAI
IEQREQALTQQRDQQAAKQSRPATTAAAKASAILAATETVAAAALVPAATEFSQLAAALE
NDPRRIYQFVRNHFTYVPYYGALKGPYLTLKERSGNDFDQAAVLVELLRAAGYTANYQYG
SMSIPLSAANNNDMAHWLGTDADASRIGNIIGSGGIPATVYTGSNAYVAMDRVWVVANIN
SANIALDPAFKSSDKQGGINLATAMGYDKTALLSAAGGLLGTDSIQNLNSGNLNAELNDL
TTQLVSQLKQNYPNAYVRDIIGGLNIVPDQSSSLPAGLPFAGTPTQTAWAEIPAGYIHTV
RLQHGAIDTTLNIPQIAGKKLSISYVGDSTPIDPPPAGAVDFGTVSPGQDGPTFTWNPGN
PNSVVIQVTSTISGTNASAFQFVSGSGTQNIPANNGSVPVKVKFTGIGQTAGRKNATLTL
TFSYQGSTIGTQTVALTGAVQSTPVAQLYLDDTLLLSEGTPSGNLTSLTLSIDHPYSASV
SNPCFTGAKYGDQCAVFTLKRTGSYVLASAFGGDHDSSLLSERQRYLDQLTGQGAANTSR
EVVSETLNIFGQSWMQQTQLADDLLNTLSDNRAIRHHRFGIVGQEDGYFVDVRAQFVSTL
PQSATAGEGTFQSSGLIASAMEHAVLEQLQGASQPAMSTVKIFHLNNQSGQKFFLANSGN
FASVWGQLSGYSSNNPGNDDYTQLLARINAGATLILPQNGQVTLNSWHGNGYIDYRVNGN
QRSQGMMIGGGLNGGYGSFLGSVNTPAAQSYYTPLQLPAGNVATPKGADPVDLGSGAYLN
QAVDLSLGGNGPRGLSFARSYNSQQVNQDSAGLGKGWNHGYHIRLNQHSDVKTALGLRSP
QDAAALIVAAYVSRDLMSPTQPSLKEWTVGALVAQWATDQLQDKAVSVQLGDRALSYRQL
PDGSFVAPPGVTTQLIKNANGTYKLSERFGTVLAFDANRRIQSLTDIDGNALSFTYTGDL
LTQVKDAYNRTLTLSYTAGKLTQVADNQGRAVTYSYTGNDLTQFRDPENKLWQYGYDASH
QILTVTDPVNAVIVSNAYDDHNRVTQQTAPRETGSALYKLHYTGLSSSDEDPAGHRTTYY
YDTTGRTVAVENALGQKSQTQYDGQGHVIQTTDALGHATQISYDANHNPTQSLNALNQAT
TFGYDGNLRLTQVNDALNHARQIDYDAEHHPVAARNALNQQTATAYTVAGLVQSQTDARN
TTTQYTYDANGHPATAKTAAHPAVTTQYDGIGRLTSLTDQAGAVTQFQYDKRGLLLTRTD
PLGKINSSTYDNAGRPVSHTDRNGHTVSSSYTASGKLNQITYPGNQTVNFDYDNLDRLTT
MTDSTGTTSNSYDAAGRLTGTTDPNGFQVSYQYDAAGNLTQLTYPGNKTVGYGYDALNRL
KSVTINWLNKTESYTYDAAGRLTQASRFNASQTQYGYDNADRLTSLSHKTSGNATLASYA
YTLDANGNRTQAVVNEAKLPEQLINNSQSYTYNTTKNRLTQQNSTALTYDQEGQLKTQGT
TNYAYDYAHRLISQGNQSYVYDGIGNRIKATRNGQVTKYIYDAAGNLLAEANNSNVISKY
YIYGKGLTAMVDAATGQLYVYHFDGTGHTVAISNASQQTQNTYAYDPYGKLMAKTEAIAQ
PFQYAGQVGILAEGNNLYYMRARYYDANLGRFISEDPIGHNGGLNLYAYVGGNPIMAVDP
DGLCPWCIAAGVGAVVSGGIDLGVQLYSNGGQFSEVNWGSVGVSALVGAGLSTLAPTGAL
LGRGGQKAVQYGYSETAGLLNTGATRFGWTYNRAVDADVLSLRIGKAHFDVPGITATAGA
NPVRDGVISGVSAVGVTFSSSAK
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgggctttggggtttcggccatggcggcccctaccgacactggcccagcgaaatgggta
ttgcctgccgtggcgcaggccgtcgtcgagccacacgtaccggcaccagccccaacatcc
cctgccggctgggtcaaccagactgcggaaccggtatccccggaagcggcgcaggccatc
atcgagcaacgcgaacaggcgctgacacagcagcgcgaccagcaagcagcgaagcaaagc
cggccagcgactactgccgcagccaaagcctcggcaattttggccgctacggaaaccgtg
gccgcagccgcgctggtgcctgccgccaccgagtttagccaactagcggccgcgttggaa
aacgatccgcgccgcatttaccagttcgtccgcaaccattttacttacgtcccgtattac
ggcgccttgaaaggcccttatctgaccttgaaagaacgcagcggcaacgacttcgaccag
gccgccgtgctggtggaattgctgcgggcagcaggttacaccgcgaattaccaatacgga
agcatgagcattcccctttcagcagccaataataatgacatggcgcactggctgggtacc
gatgccgatgccagtcgtatcggcaatatcatcggctcgggcggcattcccgccaccgtc
tacaccggcagcaacgcctatgtcgcgatggatcgggtctgggtggtagctaacatcaac
agcgccaacatagcactggacccggcctttaaatccagcgacaaacagggcggcatcaat
ctggctaccgcaatgggttacgacaaaactgctttgttaagtgcggccggcggcttgctg
ggtactgattcgatccaaaacctgaatagcggcaatctgaatgccgaactgaacgatttg
accacacagttggttagtcaactcaagcaaaattatcccaacgcctatgtgcgcgacatc
atcggcggcttgaacatcgtccctgaccaaagcagcagtttgccggctggcttgccgttc
gccggtacaccgacgcaaaccgcctgggccgaaattcccgccggttacattcataccgtg
cgtctgcaacacggcgcgatcgacactacgttgaatattccacaaattgccggcaaaaaa
ctcagcatcagttatgtcggagacagtacgcctatcgatccgccgccggctggagctgtg
gatttcggcaccgttagtcccggccaggatggcccgacctttacctggaatcccggcaac
cccaacagtgtcgtgatccaggtcaccagcacgatcagcggcacgaatgccagcgcgttt
caattcgtgtccggcagcggcacccagaacatccccgctaataacggcagcgttccggta
aaagtcaaattcaccggcatcggccagacggccgggcgtaaaaacgctaccttgaccctc
acgttcagctaccagggcagcaccatcggcacccaaaccgtggccttgaccggcgcggtg
caaagcacgccggtggcccaactctatctggacgataccctgttgctatcggaaggcact
ccctccggtaatttgacaagcctcaccttgagcatagaccatccctacagcgcctcggtc
agcaatccctgctttaccggcgccaaatacggcgaccaatgtgctgtcttcacactcaag
cgtaccgggtcttacgtactggcctcggcctttggcggcgaccatgacagcagcctattg
agcgaacgccaacgctatctggaccaactgaccgggcaaggcgcggccaacacctcccgc
gaagtggtcagcgaaaccttgaacatcttcggccaaagctggatgcaacaaactcaactg
gccgacgatctgctgaacaccttgagcgataaccgcgccatccgccatcaccgcttcggt
atcgtcggtcaggaagacggttatttcgtcgatgtcagagcccagttcgtgtccacgcta
ccgcagagcgcgactgccggcgaaggcaccttccagagttcgggcttgatcgccagcgcc
atggaacacgcggttctggagcaattgcaaggcgccagccagccggcaatgtccaccgtc
aaaattttccacctcaacaatcaaagcggtcaaaagttctttttggctaacagcggcaat
tttgccagtgtctgggggcagttaagcggttactcgtccaacaatccaggtaatgacgac
tacacgcaattactggctcggatcaacgccggcgccacgctgattctgccgcaaaacggc
caagtcaccctcaacagctggcacggcaacggttacatcgattaccgggtcaacggcaac
caacgcagccagggtatgatgattggcggtggcctgaacggtggctatggctctttcctg
ggctcggtgaatacgccggcggcgcaaagctattacacgccgctacaactgcccgccggc
aacgtcgccacccccaagggcgccgacccggtcgatctaggcagcggcgcctacctaaat
caggccgtcgatctcagcctgggcggcaacggcccgcgcggcttgagcttcgctcgcagc
tacaacagccagcaggtcaatcaggattcggccgggctgggtaagggttggaatcacggc
taccacattcgcttgaaccagcacagcgacgtcaaaaccgccctcggcctacgcagcccg
caggacgccgccgcgttgatcgtggcggcatatgtcagccgcgacctgatgtctccgacc
cagccttccctgaaggaatggaccgtcggcgcgctggtggcgcaatgggccaccgaccag
ttgcaggacaaagccgtcagcgtccaactgggtgaccgggccttgagctaccggcaattg
cccgacggcagcttcgtcgccccgccaggtgttaccacccaactgatcaaaaacgccaac
ggcacctacaaactgagcgaacgcttcggcacggtgttggccttcgacgccaaccgccgc
atccaaagcctgaccgacatcgacggcaatgccttaagctttacctacaccggcgacctg
ctgacccaggtcaaggatgcctacaaccgcaccctgaccctgagctacaccgccggcaaa
ctcactcaggtggccgacaaccagggccgggccgtgacctacagctacaccggcaacgac
ctaacccaattccgcgacccggagaacaaactctggcaatacggctacgacgccagccac
caaatcctcacggtcaccgatccggtgaacgccgtcatcgtcagcaacgcctacgacgat
cacaaccgggtgacccagcaaaccgcgccccgcgaaaccggcagcgccttgtacaaactg
cattacaccggcctgtcgtcatccgatgaagacccggccggccaccgcaccacctattat
tacgacactaccggtcgcaccgtggcggtggaaaatgccctgggccaaaaaagccaaacc
caatacgacggccagggccatgttatccaaaccaccgatgctttgggccacgcgacccaa
atcagctacgacgccaaccacaaccccacgcaaagcctcaacgccctgaatcaggccacc
acgttcggctacgacggtaacttgcggctaacccaagtcaacgacgcgctgaaccacgcc
cgccagatcgactacgacgccgaacaccacccggtggccgcccgcaatgccctgaaccag
caaaccgccacggcctacaccgtcgccggtctggtccaaagccaaaccgacgcgcgtaac
accaccacccaatacacctacgacgccaacggccacccggccaccgccaagaccgccgcc
catccagcggtcacgacccaatacgacggcatcggccgcctgaccagcctcaccgaccag
gccggcgccgtgacccagttccaatacgacaagcgcggcctgctgctgacccgcaccgat
cccctcggcaagatcaacagctcgacctacgacaacgccggccgccccgtcagccacacc
gaccgcaacggccataccgtcagcagcagctacaccgccagcggcaagctcaaccagatt
acctaccccggcaaccagaccgtcaacttcgactacgacaacctggatcgtttaaccacg
atgaccgactcgaccggcaccaccagcaacagttacgatgccgcaggccggctgaccggt
accaccgacccgaacggcttccaagtcagctaccaatacgacgccgccggtaacctgacc
caactgacctatcccggaaacaagaccgtcggatatggctacgacgccttaaaccgacta
aaaagcgtcacgatcaactggctgaacaaaaccgaaagctatacctatgatgcagccggc
cggctgacccaggccagtcgcttcaacgccagccaaacccaatacggctacgacaacgcc
gataggctgaccagtctgagccacaagaccagcggcaacgccaccctagccagttatgcc
tacaccctggacgccaacggcaaccgcacccaagccgtggtcaacgaagccaagttaccc
gaacaactgatcaacaacagccaaagttacacgtacaacaccaccaaaaaccgactgacc
cagcaaaacagcaccgcgctgacttacgatcaagaaggccagctcaagacccagggcacc
accaactacgcctacgactacgcccaccgcctgatcagccagggcaaccaaagctacgtc
tacgacggcatcggcaatcgcatcaaagccaccagaaacggacaagtcactaagtacatt
tacgacgccgccggcaacctgctggccgaagccaacaacagcaacgtcatcagcaaatac
tacatctacggtaaaggcctgaccgcgatggtcgacgccgccaccggccaactttacgtc
taccacttcgacggcaccgggcatacggtcgccattagcaacgccagccagcaaacccaa
aatacctatgcctacgatccgtatggcaagctgatggccaaaaccgaagccatcgcccag
ccgttccaatacgccggacaggtgggtatcctggccgaggggaacaacctttactacatg
cgggcgcggtattacgatgcgaatcttggacggtttatctcggaagacccgattgggcat
aacggcgggctcaacctgtatgcctatgtcggggggaatcccattatggcggtcgatcca
gatgggttatgcccttggtgtattgctgctggtgtcggtgcagttgttagtgggggcatt
gatcttggggttcaactgtacagtaacggcggtcaattttccgaagtcaattggggaagt
gtcggtgtttcggctctcgttggagccggactctcgacactggcgccaactggagcatta
ctaggacgtggcggacaaaaagctgtgcaatatggatactcagaaacagcaggtttacta
aatacaggagccactcgttttggttggacgtataaccgcgcggtagatgcggatgtgttg
agtcttcgaattggtaaagctcatttcgacgtgcctggaataactgcaacagctggtgca
aatccagttagggatggagtaatttctggtgtctcggcggtcggcgtaacctttagttct
agtgctaaataa
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