Methylorubrum extorquens DM4: METDI0054
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Entry
METDI0054 CDS
T00947
Symbol
trpB
Name
(GenBank) tryptophan synthase, beta protein
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00260
Glycine, serine and threonine metabolism
mdi00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01230
Biosynthesis of amino acids
Module
mdi_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
METDI0054 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
METDI0054 (trpB)
Enzymes [BR:
mdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
METDI0054 (trpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CAX21732
UniProt:
C7CLX9
LinkDB
All DBs
Position
complement(53123..54364)
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AA seq
413 aa
AA seq
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MTLNPAPNSFRTGPDERGRFGIFGGRFVAETLMPLILDLEKAYADAKADPSFKADMESYG
THYIGRPSPLYYAERLTEHLRAQAPAGQGAKIFFKREELNHTGSHKVNNVLGQILLARRM
GKPRIIAETGAGQHGVATATLCARFGLKCVVYMGAVDVERQAPNVFRMKMLGAEVIPVQS
GTRTLKDAMNEALRDWVTNVSDTFYCIGTVAGPHPYPAMVRDFQSVIGIETKQQMLEMEG
RLPDSLIACIGGGSNAMGLFHPFLDDRDVEIYGVEAAGHGVQSGLHAASLTGGRPGVLHG
NRTYLLMNEDGQIADAHSISAGLDYPGIGPEHAWLHEMGRVTYLSATDAETLEAFKLCSM
LEGIIPALEPAHALSKVMELAPTKPAEHLMVLNLSGRGDKDIPQVAQIFGQTL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgaaccccgctcccaattccttccgcaccgggccggacgagcgcggtcgcttc
ggcatcttcggcggccgcttcgtggccgagacgctgatgccgctgattctcgatctcgag
aaggcctacgccgacgccaaggccgacccgtcgttcaaggcggatatggaatcctacggc
acccactacatcggccggccgagcccgctctactatgccgagcgcctgaccgagcacctg
cgcgcccaggctccggcggggcagggggcgaagatcttcttcaagcgcgaggagctgaac
cacaccggctcgcacaaggtgaacaacgtcctcggccagatcctgctcgcccgccgcatg
ggcaagccgcggatcatcgccgagaccggcgcgggccagcacggcgtcgcgaccgcgacg
ctctgcgcccgtttcggcctgaaatgcgtggtctacatgggcgccgtcgatgtcgagcgg
caggccccgaacgtgttccgcatgaagatgctcggcgccgaggtgatcccggtgcaatcc
ggcacgcgcacgctcaaggacgcgatgaacgaggcgctgcgcgactgggtcaccaacgtc
tcggacaccttctactgcatcggcaccgtggccggcccccatccctatccggcgatggtg
cgcgatttccaatcggtgatcggcatcgagacgaagcagcagatgctggagatggagggc
cgcctgccggattcgctcatcgcctgcatcggcggcggctcgaacgccatgggtctgttc
caccccttcctcgatgaccgcgacgtcgaaatctacggcgtcgaggcagccgggcacggc
gtgcagagcggcctccacgccgcctcgctcacgggcggccgcccgggcgtgctgcacggc
aaccggacctacctgctgatgaacgaggacggccagatcgccgacgcccactcgatctcg
gcgggcctcgattatcccgggatcggccccgaacacgcatggctgcacgagatgggccgg
gtcacctacctgtcggcgaccgatgccgagacgctggaggcgttcaagctctgctcgatg
ctagagggcatcatcccggctctggagcccgcgcacgcgctgtcgaaggtgatggagctc
gcgccgaccaagccggcggagcacctgatggtgctgaacctctctggccgcggcgacaag
gacatcccgcaggtggcgcagatcttcggtcagacgctctga
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