Methylorubrum extorquens DM4: METDI0060
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Entry
METDI0060 CDS
T00947
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
METDI0060 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mdi03011
]
METDI0060 (rpsA)
Ribosome [BR:
mdi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
METDI0060 (rpsA)
Bacteria
METDI0060 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
CAX21738
UniProt:
C7CLY5
LinkDB
All DBs
Position
complement(58746..60458)
Genome browser
AA seq
570 aa
AA seq
DB search
MSAGLNVSSSAREDFAALLEESFLQHEITEGSVVKGTVVGIEKDVAVIDIGAKTEGRVPL
KEFTGPGREGELKVGDEVEVYVDRIENALGEAVISRDKARREESWVKLEKAFEANERVTG
TIFNQVKGGYTVDLDGAVAFLPRSQVDIRPVRDVTPLLGTPQPFQILKMDRRRGNIVVSR
RTVLEESRAEQRSELVANLEEGQVIDGVVKNITEYGAFVDLGGIDGLLHVTDMAWRRVNH
PSEVVTIGQTVKVKIIKINHETHRISLGIKQLLADPWEGIAARYPEEAKLKGRVTNITDY
GAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVQILEVDSVKRRISLGLKQTL
QNPWDAFAEKHPVGSEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFK
KGDMVRAQVLDVDVEKERISLGVKQLGGDPFAEAGEVKKGQIVTCEVVEVKDSGLEVKLV
DTDMQTFIRRAELARDRGDQRPERFAAGEKFDARVIQFDRKARRVQVSIKALEVAEEKEA
MAQFGSADSGASLGDILGAAFNKKKGGDEE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggtctgaacgtaagctcttcggcccgcgaggatttcgcggccctgctcgag
gaatccttcctccagcatgagatcaccgaaggttcggtcgtcaagggcaccgtcgtcggc
atcgagaaagatgtcgccgtcatcgatatcggtgccaagaccgaggggcgcgtccccctc
aaggaattcaccggcccgggccgcgagggcgagctcaaggttggcgacgaggtcgaggtt
tacgtcgaccgcatcgagaacgcgctgggcgaggccgtcatctcgcgcgacaaggcgcgc
cgcgaggagtcgtgggtcaagctcgagaaggccttcgaggccaacgagcgcgtcaccggc
acgatcttcaaccaggtcaagggcggctacaccgtcgatctcgatggcgccgtggcgttc
ctgccgcgctcccaggtcgatatccgcccggtccgcgacgtgaccccgctgctcggcacg
ccccagccgttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcgcgc
cgcaccgtgctcgaagagagccgcgccgagcagcgctcggagctggtggccaaccttgag
gaaggtcaggtcattgacggcgtcgtcaagaacatcaccgagtacggcgccttcgtcgat
ctcggcggtatcgacggcctgctgcacgtcaccgacatggcgtggcgccgcgtgaaccat
ccgtccgaggtcgtgaccatcggccagacggtcaaggtcaagatcatcaagatcaaccac
gagacgcaccgcatctcgctcggcatcaagcagctcctggccgatccgtgggagggcatc
gccgcccgttaccccgaggaagccaagctcaagggccgcgtgaccaacatcaccgactac
ggcgccttcgtggagctggagccggggatcgagggcctgatccacgtctccgagatgagc
tggaccaagaagaacgtccatccgggcaagatcgtctccacctctcaggaggtcgaggtg
cagatcctggaagtcgattcggtcaagcgtcgtatctcgctcggcctcaagcagaccctt
cagaacccgtgggatgccttcgctgagaagcacccggtcggttccgaggtcgagggcgag
gtcaagaacaagaccgagttcggcctgttcatcggcctcgaaggcgatgtcgacggcatg
gttcacctgtcggatctcgactggaaccgtcccggcgagcaggtcatcgaggagttcaag
aagggcgacatggtgcgtgcccaggttctcgacgtcgatgtcgagaaggagcgcatctcg
ctcggcgtgaagcagctcggcggcgatcccttcgccgaagccggcgaggtcaagaagggc
cagatcgtcacctgcgaggtcgtcgaggtgaaggattccggcctggaggtgaagctcgtc
gacaccgacatgcagaccttcatccgccgcgccgaactcgcccgtgaccgtggcgaccag
cgtcccgagcgtttcgccgccggcgagaagttcgacgcgcgcgtcatccagttcgatcgc
aaggcccgccgcgtgcaggtctcgatcaaggctctggaagtcgccgaggagaaggaggcg
atggcccagttcggctccgctgattcgggtgcttcgctcggcgacatcctcggtgccgcc
ttcaacaagaagaagggtggcgacgaggagtaa
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