Methylorubrum extorquens DM4: METDI0148
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Entry
METDI0148 CDS
T00947
Symbol
rarA
Name
(GenBank) recombination protein
KO
K07478
putative ATPase
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
METDI0148 (rarA)
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_30
nSTAND3
AAA_3
Sigma54_activ_2
Sigma54_activat
AAA_18
AAA_28
AAA_2
AAA_14
RNA_helicase
AAA_33
AAA_17
bpMoxR
DUF4350
AAA_11
AAA_24
AAA_25
IstB_IS21
Cytidylate_kin
Rad17
SKI
ABC_tran
TIP49
Viral_helicase1
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
CAX21819
UniProt:
C7C6R5
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All DBs
Position
146255..147568
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AA seq
437 aa
AA seq
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MSDLFVSAGLETGAPRPLADRLRPRRLAEVVGQEHLTGPDGALTRLLASRSLGSLVFWGP
PGTGKTTVARLLAHETALHFEQISAIFSGIGDLRKVFEAARKRRATGQGTLLFVDEIHRF
NRAQLDAFLPVMEDGTVTLVGATTENPSFELNAALLSRARVLLFRALDAPALARLLARAE
EMDGQPLPLDEEARAALIRMADGDGRAALTLAEEVWRSARPGEILDAETLQSLVQRRAPI
YDKAQEGHYNLISALHKTVRGSDPDAALYYLCRMLDAGEDRLFIARRLVRMAVEDIGLAD
PQALVVANAAKDAFDFLGSPEGELALAQVTVYLACAPKSNAVYNAYKAATRVAKAAGSLA
PPRTILNAPTGLMRRIGYGEGYRYDHDEPDAFSGQDYWPEALGRQHFYEPTDRGMETRYR
ERLAYWERLRQERRGDD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgttcgtttccgccggtcttgagacgggtgcgccccggccgctcgccgat
cgtctgcgcccgcgtcgcctcgcggaggtcgtggggcaggagcatctcacggggcccgac
ggggcgctgacgcgtctgctcgcctcgcgcagcctgggctcgctcgtgttctgggggccg
cccggcaccggcaaaaccaccgtagcgcggctgctcgcacacgagaccgccctgcatttc
gagcagatctcggcgatcttctcgggcatcggcgatctgcgaaaggtgttcgaggcggca
cgcaagcggcgtgcgacgggccagggcaccctcctgttcgtcgatgagatccatcgcttc
aaccgtgcccagctcgatgccttcctgccggtgatggaggacgggaccgttacgctcgtc
ggcgcgacaacggagaatccgtcgttcgaactgaatgccgccctgctgtcgcgcgctcgg
gtgctgctattccgtgcgttggatgcgcccgccctcgcacggctgctggcccgggccgag
gaaatggacgggcagccgctgcccctcgacgaggaggcgcgcgcggcgctgatccgcatg
gcggacggcgacgggcgcgccgcgctgacgctggcggaagaggtgtggcgctcggctcga
cccggcgagatcctcgacgcggagacgcttcagagcctcgtgcaacgccgggcgccgatc
tacgacaaggcgcaggaggggcactacaacctcatctcggcgctgcataagacggtgcgc
ggctcggatcccgacgcagcgctgtactatctctgccgtatgctggatgccggcgaggac
cgattgttcatcgcccggcgcctcgtgcggatggcggtggaggatatcggactggccgac
ccgcaggccctcgtcgtggcgaacgcggccaaggacgccttcgacttcctcggttcgccc
gagggcgaactcgcgctggcacaggtcaccgtctatctcgcctgcgcgccgaaatcgaac
gcggtctacaacgcctacaaggcggccacgcgggtggcgaaggctgcgggttcactcgcg
ccgccgcgcaccattctcaacgcccccacggggctgatgcggcggatcggctacggcgag
ggttaccgctacgaccacgacgagcccgatgccttctcgggccaggattattggccggaa
gcgctcgggcgccagcatttctacgagccgaccgaccggggcatggaaacccgctaccgg
gagcggctggcctactgggaacggctgcggcaggagcgccgcggcgacgattga
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