Methylorubrum extorquens DM4: METDI0201
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Entry
METDI0201 CDS
T00947
Name
(GenBank) hypothetical protein, putative exonuclease domain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03030
DNA replication
mdi03430
Mismatch repair
mdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METDI0201
03430 Mismatch repair
METDI0201
03440 Homologous recombination
METDI0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI0201
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI0201
Enzymes [BR:
mdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METDI0201
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
METDI0201
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
METDI0201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAX21870
UniProt:
C7C6W6
LinkDB
All DBs
Position
complement(205453..206346)
Genome browser
AA seq
297 aa
AA seq
DB search
MKVVAIDFETANERRDSACAVGLAWIEGGRVVRRESRLIRPPQLRFSPGNIRVHGILPAD
VRDAPTFPEVIAEFLPDLSGGLMLAHNAGFDMGVLAASLAAWGEPVPDMAGHCTLQIARR
VFPDPAGHGLAKVAGRLGIRFEHHDAGEDAFACAEIALAALRETGAADIADLARGLGLTP
IRALTTPRRDMTRSTSAKALRASGIVDLRPTNALRFAMRGSTGNRYQLEFEERTDGPYLR
CSCPAGTHRRRCRHVDALVEGDITELTSNNFDDVERLRQLLDGKSVGPLRIKGVAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgcgatcgatttcgagaccgccaacgagcggcgcgacagcgcctgcgcg
gtcgggcttgcctggatcgaagggggccgcgtggtgcggcgcgaatcccggctgatccgc
ccgccgcagttgcggttctcgcccggcaatattcgcgtccacggcatcctgccggcggac
gtgcgcgacgcgccgacctttcccgaggtcatcgccgaattcctgcccgacctgtcgggc
gggttgatgctcgcgcacaatgccggcttcgacatgggcgtgctcgccgcttcgctcgcc
gcatggggtgagccggtgccggacatggccggccactgcactctccagatcgcccggcgc
gtgttccccgatcccgccggccacggcctcgccaaggtggcgggccgcctcggcatccgc
ttcgagcaccacgatgcgggcgaggatgcctttgcctgcgccgagatcgcgctcgcggcc
ctgcgcgagacgggtgcggccgacatcgccgacctcgcccgtgggctcggactcactccg
atccgtgccctcaccacgccgcgccgggacatgactcgctcgacctcggcgaaagcgctg
cgcgcctcgggcatcgtcgatctccggcccacgaatgcgctgcgcttcgccatgcgcggc
agcaccggcaaccgctaccagctcgaattcgaggagcggacggacgggccgtatctgcgc
tgctcctgcccggcgggcacccaccgccgccgctgccgccatgtcgatgcgctggtcgag
ggcgatatcaccgagctgacgtcgaacaatttcgacgatgtcgagcggctgcgccaattg
ctcgacggcaagagcgtcggaccgctgcggatcaagggcgtcgccgctgcctga
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