Methylorubrum extorquens DM4: METDI0522
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Entry
METDI0522 CDS
T00947
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdi03009
]
METDI0522 (rsmB)
Enzymes [BR:
mdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
METDI0522 (rsmB)
Ribosome biogenesis [BR:
mdi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
METDI0522 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
FtsJ
Methyltransf_37
Methyltransf_15
Methyltransf_23
RsmF-B_ferredox
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
CAX22180
LinkDB
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Position
485815..487179
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AA seq
454 aa
AA seq
DB search
MAPTPNRRPPPPFDPSVPGLAARHAAREAVATLLGPARGLALEDALAQAARGAGLDTGEA
ALARAIATASFRRLGFIKAALAARLRDGLPEDRPHLLALLVTGAAQILDLAVADHAAVDL
SVRLAKADPQLQHLVPLVNAVLRRIARERDAIRAQESDPLAHNTPDWLARRWQAAYGEEA
ARRIAVAHLEGAAVDLTVPHDPEIWAERLGGIRLDLGSVRLAEVRQAVAELPGYAEGAWW
VQDAAAALPVRLLAPVSGERVVDLCAAPGGKTAQMAAAGAAVTAVDRSAVRLERLGRNLE
RLGLSAEVVTADALALPEDAPFDAVLLDAPCSATGTIRRHPDVVWTKSEADVVRLAGLQR
RLLDKAARLTRPGGRLVYCTCSLEPEEGSAQVAAFLARNPDFERIAITPDRLSGHAELID
ASGDLRTLPSHVVGGIGRAGGLDGFFASLLRRRD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccgacccccaaccgccgcccgccgccccccttcgacccgtcggtccccggcctt
gcggcacgccatgccgcgcgggaagcggtggcgaccctgctcggtcccgcccgcggcctg
gcgctcgaggacgcgctcgcccaggccgcccgaggcgcggggttggatacgggggaagcc
gcactggctcgggcgatcgccacggcgagcttccgccgcctcggcttcatcaaggcggcg
ctcgccgcccgcctgcgggacggcttgccggaggataggccccacctcctcgccctgctg
gtgacgggtgccgcgcagatcctcgatctggcggtggcagaccacgccgccgtcgatctc
tcggtgcgcctcgccaaagccgatccgcagctccagcacctcgtgcccctcgtcaacgcc
gttctgcgccggatcgcacgcgagcgtgacgcgatccgggcgcaggagagcgatccgctc
gcccacaacaccccggattggctcgcccgacgctggcaggccgcctacggtgaggaggcc
gcgcgccgcatcgccgtcgcacatctcgaaggcgcggccgtcgatctcacggttccgcac
gatcccgaaatctgggccgaacggctcggaggcatccggctcgatctcggatcggtgcgg
ctcgccgaggtgcggcaggcagtggccgagcttcccggctacgcggagggcgcatggtgg
gtgcaggatgccgccgccgccctgccggtgcggctgctcgcgcccgtctcgggcgaacgc
gtcgtcgatctctgcgcggcacccggcggcaagacggcccagatggccgccgccggcgcc
gcggtcaccgcggtggaccgttcggccgtgcggctggaacgcctcgggcggaacctcgaa
cgcctcggcctttccgccgaagtggtcaccgccgatgccctcgctctgccggaggacgcg
cccttcgacgcggtgctgctcgatgcgccctgctcggcgaccggcaccatccgtcgccat
cccgatgtcgtctggacgaagagcgaggcggacgtggtccgcttggccggccttcagcgc
cgcctgctcgacaaggccgcgcggttgacgcggcccggcggtcgcttggtctactgcact
tgctccctggagcccgaggaaggcagcgcacaggtggcggcgttcctggctcgcaatccg
gatttcgagcggatcgcgatcacgcccgaccggttgtccggccatgccgagctgatcgac
gcctcgggcgacctgcgcaccttgccctctcacgtcgtgggcggcatcgggcgggcgggt
ggcctcgatgggttcttcgcgagccttctgcggcggcgcgactga
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