Methylorubrum extorquens DM4: METDI0632
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Entry
METDI0632 CDS
T00947
Symbol
ffh
Name
(GenBank) signal recognition particle protein, GTPase
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02024
Quorum sensing
mdi03060
Protein export
mdi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
METDI0632 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
METDI0632 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METDI0632 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mdi02044
]
METDI0632 (ffh)
Enzymes [BR:
mdi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
METDI0632 (ffh)
Secretion system [BR:
mdi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
METDI0632 (ffh)
Eukaryotic Sec-SRP protein
METDI0632 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_22
AAA_16
Thymidylate_kin
6PF2K
DnaB_C
AAA_19
APS_kinase
AAA_17
AAA_31
AAA
TctA
ResIII
AAA_14
ArsA_ATPase
AAA_5
NACHT
ABC_tran
AAA_18
ATPase_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAX22279
UniProt:
C7CAQ4
LinkDB
All DBs
Position
595451..597013
Genome browser
AA seq
520 aa
AA seq
DB search
MFEGLSDRLSGILSGLTRRGALTEADVTAAMREVRRALLEADVALEVVRSFTDKVREKAV
GAVVLKSVTPGQMVVKIVNDELIAMLGTDASVVDLNAPAPVAILMVGLQGSGKTTTTAKI
ARRLNQRDKRRVLLASLDTRRPAAMEQLAVLAKQVEVESLPIVAGQSAVQIAKRAMEAAR
LGGFDVVMLDTAGRTTVDEGLMNEAAEVKAATKPHEVLLVADALTGQDAVNTARAFDERL
GVTGIVLTRMDGDSRGGAALSMRAVTGKPIKLVGVGEKVDALEEFHPHRVANRILGMGDI
VSLVEKAAETIDHEQALRTAEKMRKGKFDLEDLSMQLAQMEKMGGIGGLMGMLPGMGQMK
KQVEGANLDEKMFKRQRAIISSMTAGERKNPDLLKNSRKKRIAAGAGVKVEEINKLLKMH
RTMADMMKAMGSGKRGGIGQALGNMFGLGGGMPGGLPGGMKLPPGMPEPTPEQIAEIEKQ
FGGKLPPMPAGLGGGKMPGLPGLGGPKMPGLGGFLPGKKK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaggcctttccgaccgcctttccggtatcctctccggcctgacgcgccgcggc
gccctgacggaagccgacgtcaccgccgccatgcgcgaggtgcgccgcgcactgctcgaa
gccgacgtggcgctggaggtggtgcgctcgttcaccgataaggtgcgcgagaaggcggtg
ggcgccgtcgtgctcaagtcggtgacgcccggccagatggtcgtgaagatcgtcaacgac
gagctcatcgcgatgctcggcaccgatgccagcgtcgtcgatctcaacgcccccgccccc
gtcgccatcctcatggtcggcctccagggctcgggcaagacgaccaccacggccaagatc
gcccgacggctgaaccagcgcgacaagcgccgggtgctgctcgcctccctcgacacgcgg
cgtcccgcggcgatggagcagttggcggtgctcgccaagcaggtcgaggtcgagagcctg
ccgatcgtcgccggccagtcggcggtgcagatcgccaagcgtgccatggaagccgcccgc
ctcggcgggttcgacgtggtcatgctcgacaccgccggccgcaccacggtcgacgagggc
ctgatgaacgaggccgccgaggtcaaggcggcgacgaaaccccacgaagtcctgctggtg
gccgacgcgctcactggccaggacgcggtcaacaccgcgcgcgccttcgatgagcgcctc
ggcgtcaccgggatcgtgctgacccgcatggacggcgattcccgcggcggcgcggcgctc
tccatgcgcgccgtcaccggcaagccgatcaagctcgtcggcgtcggcgagaaggtcgat
gcgctggaggaattccacccgcatcgggtggccaaccgtatcctcggcatgggcgacatc
gtttcgctcgtcgagaaggcggccgagaccatcgaccacgagcaggccctgcgcaccgcc
gagaagatgcggaagggtaagttcgacctcgaagacctgtcgatgcagctcgcccagatg
gagaagatgggcggcatcggcggcctgatggggatgctgcccggcatggggcagatgaag
aagcaggtcgagggcgccaacctcgacgagaagatgttcaagcgccagcgcgccatcatc
tcctcgatgacggcaggggagcgcaagaaccccgatctgctcaagaacagccgcaagaag
cgcatcgcggcgggtgccggcgtcaaggtcgaggagatcaacaagctcctcaagatgcac
cggaccatggccgacatgatgaaggcgatgggctcgggcaagcgcggcggcatcggccag
gcgctcggcaacatgttcggtctgggcggtggcatgccgggcgggttgccgggcggcatg
aagctgccgccgggcatgccggagccgacgccggagcagatcgccgagatcgagaagcag
ttcggcggcaagctgccgccgatgccggcggggctcgggggtggaaagatgccgggcctg
ccgggtctgggcggaccgaagatgccggggctgggcggcttcctgccgggtaagaagaaa
tga
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