Methylorubrum extorquens DM4: METDI0729
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Entry
METDI0729 CDS
T00947
Name
(GenBank) DNA-binding response regulator in two-component regulatory system
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02020
Two-component system
mdi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
METDI0729
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METDI0729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mdi02022
]
METDI0729
Two-component system [BR:
mdi02022
]
OmpR family
QseC-QseB (quorum sensing)
METDI0729
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
CAX22371
UniProt:
C7CBK0
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All DBs
Position
complement(686064..686726)
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AA seq
220 aa
AA seq
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MRILVVEDDPILSDGLRAGLGLSGATVECVATCADADAALATSGFAAVVLDLMLPDGSGL
DVLRGLRGRGDRTPVVLLTARDAVADRIAGLDGGADDYLGKPFDLDELSARIRAVVRRAS
GRAAACLEHAGIRLDPAELAVTLHGRPIPVSRREFMVLAALMERPSVLRSKGELEERLYG
WQEEVESNAVEVHVHNLRAKIGKHTIETVRGLGYRMRAPA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcctcgtcgtcgaggacgaccctatcctctccgacggcctcagggccgggctc
gggctgtccggtgcgacggtcgaatgcgtcgcgacatgcgcggacgccgatgcggcgctt
gcgacgagtggtttcgccgccgtggtgctcgacctgatgctgcccgacggatccgggctc
gatgtcctgcgcggcctgcgcgggcggggcgaccgcacgccggtcgtcctgctgacggcg
cgcgacgcagttgcggaccggatcgccggactcgacggcggggccgacgactacctcggc
aagccctttgacctcgacgagctctcggctcgcattcgcgccgttgtcaggcgtgcgtcg
gggcgcgccgcggcctgcctagagcatgccggcatccgcctcgatcccgccgagctcgcc
gtcacgcttcacggacggccgattcccgtgtcgcggcgcgagttcatggtgctggcggcc
ttgatggagcgcccgagcgtgttgcgctccaaaggcgagttggaagagcgcctctacggc
tggcaggaagaagtcgagagcaacgcggtcgaggtgcacgtgcacaacctgcgcgccaag
atcggtaagcacaccatcgagacggtgcgcggtctcggctaccgaatgagggcgcccgca
tga
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