Methylorubrum extorquens DM4: METDI0851
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Entry
METDI0851 CDS
T00947
Name
(GenBank) putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains
Organism
mdi
Methylorubrum extorquens DM4
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS_9
PAS
GAF_2
PAS_8
PAS_11
DUF4178
Motif
Other DBs
NCBI-ProteinID:
CAX22483
UniProt:
C7CCD7
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Position
783114..786200
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AA seq
1028 aa
AA seq
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MGRYLPPLPPNEAERLAALYDLHILDSAPEAHFDAVCRTAAALFSVPIAFVSLVDSDRQW
FKAKCGIAAEGTPRDVAFCAYAILSDDVLVVENAAVDPRFAINPLVVGDLAVRFYAGAPL
ILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAHIELHQGRLTIEAALAERTRSE
ALIAANEARYRALADALPQMVWVMTSADGSAIYTNERFRTYYGSIGPQREERTSRNHPAD
TERMAEEWQRAVTHEHTYAVEGRLRRHDGTYRWHKLVMVPVRQNGTVVEWLGTALDIEDI
VTARSTLEHTTDLLRLAQEAAGAGVWQRDLDDDVVRHSPMSARMHGFLGEPDLSGWIAVS
IAEWAARVHPDDLAQVRAMHAGALRNGTTYKVEFRVRQSADMDDYRWLMGFGRVIRDETS
GRPLRVVGLNLDITDRRTTEDALAQSQTHLRASEERLALALDSGNDGLFDWNVTTGKVWY
SDRWQTMLGYKPGEIEPHILSWERLVHPDDLHQARTLLTEHFGELSATYSSEHRLRSKSG
EYTWVLGRGRVVARDEQGAPLRMVGTSIDITERKASEQRIAYMARHDVLTGLPNRTVFHE
HLEQRLAEVRRGRGQAALLCLDLDRFKSINDMLGHPAGDELLCQIATRLRATVRGGDVVV
RLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGGHLVTVGISIGIAFAPTNGDTS
ETLFKNADLALYRAKASARNTYCFYEAGMDAAVEARMQLEFEMREAITCGSFALHYQPVL
RLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEETGLIVPLGSWALQEACREAASWPDH
LRIAVNVSAVQFQQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKS
LGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIGDPGAAAIVRAVVGIAMQLGAT
VTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPADRAIEFISSSASIERAYKRLCEAERS
DQHRVCAA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggacgatacctaccgccgctaccgccgaacgaagcagagcgcctcgcggcgctgtac
gacctgcacatcctcgactcggcgcctgaggcgcacttcgatgccgtgtgcaggactgcg
gcagcgttgttttccgttcccatcgcattcgtttcgctcgttgacagcgaccggcaatgg
ttcaaggcaaaatgcgggattgcagcagagggcacgccgcgtgatgtggctttctgcgcg
tacgcgatcctctccgacgatgtcctagtcgtggaaaatgctgctgtcgatccgcgcttt
gcgatcaaccccttggttgtcggtgaccttgccgtccgcttctacgcaggtgccccactg
atcctacgctccggcatccgggtcgggacgatctgcatctttgacacgaagccttgcagc
ttctccgaaatgcagaggacccagcttcaagacctcgctcggatcgttgttgcccacatt
gagctacatcagggacgactcacgatcgaagccgcactggcagaacgcacacgctctgag
gctttgattgctgcgaacgaggcccgctatcgcgcgctggcggacgccctgccacagatg
gtctgggtgatgacctccgcggatggcagcgccatctacacgaacgaacgctttcgcacc
tactatggatcgattggtccgcagcgtgaggagcgcaccagccgcaatcatccggctgat
accgagcgcatggctgaggagtggcagcgggcagtcactcatgagcacacttacgcggtc
gaaggacggttacgtcggcacgacggcacctaccgttggcacaagttggtcatggtgccg
gtacggcagaatggaacagttgtggagtggcttggcaccgctctcgacattgaggatatc
gtcacggctcgctccacgctggagcacacgacggatttgctgaggctggcgcaggaggct
gctggggcaggtgtttggcagcgagacctagatgacgacgtggtgcgccattcgccaatg
agcgctcgcatgcacggatttttaggtgagccggatttgagtggctggatcgctgtcagc
atcgccgaatgggcagcaagggtgcatccggacgatcttgctcaagtccgggccatgcac
gctggcgcacttcgcaacggaacgacttacaaggtcgagttccgagtgcgccaatccgcg
gacatggatgattaccgttggctgatgggatttggccgggtgatccgcgatgagacaagc
ggccgtccgttgcgggttgttggtctcaacctcgacataactgatcggcgcacaaccgag
gatgcactagctcagagtcagacgcacctccgggcgagcgaggaacggctcgcgctggcc
ctagacagcggcaatgatggcttgtttgactggaacgtcacgacagggaaggtctggtac
tcagaccgttggcagaccatgcttggctacaagccaggagaaattgagccccacatcctc
tcttgggagcgactggttcacccggatgacctccatcaagccaggacactcctcacagag
catttcggggaactctcggcgacttactcaagcgagcaccggttacgcagcaaatccggc
gaatacacgtgggtgctgggacggggccgggttgtggcgcgggacgagcaaggcgcaccg
ctgcgcatggtcggcacctctatcgacatcacggagcgaaaggcgtctgagcagcgcata
gcctacatggcgcgtcatgacgtgctcaccggcctgcccaaccgcaccgtgtttcacgag
catcttgagcaaaggctggcagaagtccgacgcggccgaggtcaggcggctctgctgtgc
ctcgacctcgaccggttcaagtccatcaacgacatgctcggccatccggccggggacgaa
ctgctctgccagatcgccacgcggttgcgagcaacagttcgcgggggtgatgtggtcgtg
cgtctaggcggcgatgagtttgccatcatcgtttcgcacctcgaccatgcacgtcaggcc
agcgtgctggcgcagcgggtgatcgatgccgtgggacagccgctcgaccttggcggccac
ctcgtgactgtcggcatcagcatcggaatcgcattcgctcctactaatggggacacatct
gaaaccctcttcaagaacgcggaccttgccctctaccgggccaaagcgtcggctcgcaac
acctactgcttctacgaagctggcatggatgcggccgttgaggcccgaatgcagcttgag
ttcgagatgcgcgaggcgatcacgtgtggcagctttgccttacactatcagcccgtgctg
cgtctggccgaccacaggatcgtcggcttcgaggcgctgatgcgttggcctcatccgaaa
cgtggcatgattgcccctgacgagttcatcccatcggcagaggagacggggctgatcgtc
ccgctcggctcttgggcgttgcaggaggcgtgtcgcgaggcagcgtcctggcctgaccat
ctgcggattgccgtcaacgtctctgctgtccagttccagcagcctggattggagcaggga
gtcatgtcggctcttgccgcctcaggtctcgcgcctcatcgcctcgtgttggaggtcacc
gagagtgtcctcgttcaggacgctgaggccgtgatcgcctgcttgcatcgattgaaaagc
ttgggggtccgcattgctttggacgacttcggtacagggtactcctcgttgagctacctg
cgccggtttcccttcgacaggatcaagatcgaccgctccttcatcagcgagatcggcgat
cccggtgctgctgccatcgtccgggctgttgtgggtattgccatgcaacttggcgcaacc
gtcacagcggaaggcgtcgagacaacggctcagcttgagcaggttcggtcggaaggctgc
atggaggtacagggctatctcgtcagccgacctctacctgctgaccgggctattgagttt
atcagcagcagcgcctccatcgaacgagcgtacaaaaggctgtgcgaagccgagcgatcg
gatcaacaccgcgtctgtgcggcgtga
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