Methylorubrum extorquens DM4: METDI0990
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Entry
METDI0990 CDS
T00947
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase / decarboxylase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00260
Glycine, serine and threonine metabolism
mdi00630
Glyoxylate and dicarboxylate metabolism
mdi00670
One carbon pool by folate
mdi00785
Lipoic acid metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01200
Carbon metabolism
Module
mdi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
METDI0990 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
METDI0990 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
METDI0990 (gcvP)
00670 One carbon pool by folate
METDI0990 (gcvP)
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
METDI0990 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CAX22613
UniProt:
C7CD85
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All DBs
Position
complement(909305..912151)
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AA seq
948 aa
AA seq
DB search
MKYDRHDPFDFAARRHIGPKLSEIDQMLETVGAKSLHALIDETLPPDIRQAEYIDFGASL
TERRSLEKLRVTANKNRLLVSLIGQGYHGTTMPPAIQRNIFENPAWYTAYSPYQPEISQG
RLEALLNFQTLVCDLTALDVANASLLDEATAAAEAMGMAKRVAKSDRNAFFVDRDCLPQT
IAVLKTRAAPLGWEVVVGDPFSDLDPSTVFGALFQYPGVNGAVHDFSGVIAGLHDAGALA
AVAADPLALTLLKAPGEMGADIAVGSMQRYGVPMGYGGPHAAYLATRDAHKRALPGRIVG
VSVDARGNRSYRLALQTREQHIRREKATSNICTSQVLLAVIASMFAVYHGPAGLKAIARR
VHRDAVRLAEGLEALGFTVEPRHFFDTITVRVGAFQGVILKSAVENGVNLRRIGTDRIGI
SVDQRTRPDIVQAVWRAFGGGDLPYDEGYPEPRLPAELERTSDYLTHPIFHMNRAESEMT
RYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPVSWPEFSELHPFVPEDQALGYRELI
DDLSQKLCAITGYDAISMQPNSGAQGEYAGLLAIRRYHLSRGEGHRTVCLIPSSAHGTNP
ASAQMCGMSVVVVGADAHGNIDVEDFRKKAEQHSEKLAACMITYPSTHGVFEARVRELCD
IVHAHGGQVYLDGANLNAMVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGMGPIGVRTH
LIPFLPSDPRSGEEGAVSAAAFGSASILPISWSYCLMMGGRGLTQATRVAILNANYIARR
LDGAYSILYAGQNGRVAHECIVDVRPFQKSAGVTVEDIAKRLIDCGFHPPTMSWPVAGTL
MIEPTESETKAEIDRFCDAMLAIREEIRAIEEGQMDRANNPLKNAPHTVQDLIGAWERPY
SREAACFPSGSLRMDKYWPPVNRVDNAYGDRNLVCSCPPTEAYGEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgatcgccacgatcccttcgatttcgcagcccgccgccatatcggcccgaag
ctctccgagatcgaccagatgctggagacggtcggcgccaagtcgctgcatgcgctgatc
gacgagacgctgccccccgacatccggcaggccgagtacatcgatttcggcgcctccctg
accgagcgccgctcgctcgagaagttgcgcgtcaccgccaacaagaaccgcctgctcgtc
tcgctgatcggccagggctatcacggcacgacgatgccgccggcgatccagcgcaacatc
ttcgagaacccggcctggtacaccgcctactcgccctaccagccggagatcagccagggc
cggctcgaggccttgctcaacttccagaccctggtctgcgatctcaccgcgctcgatgtg
gccaatgcctcgctgctcgacgaggcgaccgcggcggccgaggccatgggtatggccaag
cgcgtggcgaagtcggaccggaacgccttcttcgtcgatcgcgactgcctgccccagacc
atcgccgtgctgaagacccgcgcggccccactcggctgggaggtcgtcgtcggcgatccc
ttttcggatttggacccgtccacggtcttcggggcgctgttccagtatcccggcgtgaac
ggcgcggttcacgatttctccggcgtgatcgcagggctccatgacgccggtgcgctcgcc
gcggtcgccgccgacccgctggcgctgacgctgctgaaggcgccgggcgagatgggcgcc
gacatcgcggtcggctcgatgcagcgctacggcgtgccgatgggctatggcggcccgcac
gccgcctatctcgcgacccgcgacgcgcacaagcgggcgctgccgggccgcatcgtcggc
gtgtcggtcgatgcccgcggcaaccgctcctaccgcctcgcgctgcagacccgcgagcag
catattcgccgcgagaaggcgacctcgaacatctgcaccagccaggtgctgctcgcggtc
atcgcctcgatgttcgcggtctatcatgggccggccggcctcaaggccatcgcccggcgc
gtccaccgtgacgccgtgcgcctcgccgaggggctggaagccctcggcttcaccgtcgag
ccccggcacttcttcgacacgatcaccgtgcgcgtcggcgcgttccagggcgtgatcctg
aagagcgcggtcgagaatggggtgaacctgcgccggatcggcacggaccgcatcggcatc
agcgtcgatcagcgcacccggcccgacatcgtccaggcggtgtggcgcgcgttcgggggc
ggcgatctcccctacgacgagggctatcccgagccgcgcctgccggccgagctggagcgg
acctcggactacctgacccacccgatcttccacatgaaccgggccgagagcgagatgacg
cgctacatgcgccggctcgccgaccgcgaccttgcgctcgaccgggcgatgatcccgctc
ggctcctgcacgatgaagctcaatgccaccgccgagatgctgccagtctcctggccggaa
ttctcggagctgcacccgttcgtgccggaggaccaggcgctgggctatcgcgagctgatc
gacgatctcagccaaaagctctgcgcgatcaccggctacgacgcgatctcgatgcagccc
aattccggcgcgcagggcgagtatgcggggctgctggccatccgccgctaccacctctcg
cgtggcgaggggcaccgcacggtctgcctgatcccgtcctcggcccacggcaccaatccg
gcctcggcgcagatgtgcggcatgagcgtcgtcgtggtcggggccgacgcccacggcaac
atcgacgtcgaggatttccggaagaaggccgagcagcattccgaaaagctcgcggcgtgc
atgatcacctacccgtccacgcacggcgtgttcgaggcgcgggtgcgtgaactctgcgac
atcgtccacgcccatggcggtcaggtctatctcgacggggcgaacctcaacgcgatggtc
gggctggcgcggcctggcgacatcggcgccgatgtcagccacctcaacctgcacaagacc
ttctgcatcccgcatggcggcggcgggccgggcatggggccgatcggcgtgaggacgcac
ctgatcccgttcctgccctccgatccgcgctcgggcgaggagggcgcagtctcggccgcc
gccttcggctcggcctcgatcctgccgatctcgtggagctactgcctgatgatgggcggg
cgcggcctgacccaggcgacgcgggtggcgatcctcaacgccaactacatcgcccggcgg
ctcgatggggcctattccatcctctatgccggccagaacggacgggtcgcgcacgaatgc
atcgtcgatgtccgcccgttccagaagagcgcgggcgtcaccgtcgaggacatcgccaag
cgcctgatcgattgcggcttccacccgccgacgatgagctggccggtggccggcacgctg
atgatcgagccgaccgaatccgagaccaaggccgagatcgaccgcttctgcgacgccatg
ctggcgatccgcgaggagatccgggcgatcgaggaggggcagatggaccgggccaacaac
ccgctcaagaacgcccctcacacggtgcaggacctgatcggcgcctgggagcgaccctat
tcccgcgaggccgcctgcttcccgtcgggcagcttgcgcatggacaagtactggccgccg
gtgaaccgcgtcgacaacgcctacggcgaccgcaacctcgtctgctcctgcccgccgacg
gaagcctatggcgaggcggcggagtag
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