| Entry |
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| Symbol |
ruvC
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| Name |
(GenBank) RuvC; Holliday junction nuclease
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| KO |
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| Organism |
mdi Methylorubrum extorquens DM4
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mdi00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
METDI1109 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mdi03400]
METDI1109 (ruvC)
Enzymes [BR:mdi01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
METDI1109 (ruvC)
DNA repair and recombination proteins [BR:mdi03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
METDI1109 (ruvC)
RecFOR pathway proteins
METDI1109 (ruvC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1023777..1024385)
|
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| AA seq |
202 aa
MPYRIDALKEAETMTTDVRILGIDPGLRRTGWGLITARGSKLSYLACGVVTSDGDLPLAL
RLRELHEGLTRIVTTYTPDEVSVEETFVNKDAQATLKLGHARAVALLVPALAGLPVAEYA
ANLVKKTVAGNGHAEKVQIQAMVKFLLPKAEFKLADAADALAIAITHASHRGAIALDRRH
AVAVGGGPGAARIAAALARLDR |
|---|
| NT seq |
609 nt +upstreamnt +downstreamnt
gtgccataccggatcgatgctctgaaggaggccgagaccatgaccacggacgtccgcatc
ctcggcatcgatcccggcctgcgccgcaccggctggggtctgatcacggcgcggggcagc
aagctgtcctacctcgcctgcggcgtcgtcacctccgacggtgacctgccgctggcgttg
cgcctgcgcgagctgcacgagggactgacccgcatcgtcacgacctacacgcccgacgag
gtctcggtggaggagaccttcgtcaacaaggacgcgcaggccacgctcaagctcggccat
gcccgcgccgtggcgctgctggtgccggcgctcgccggtctgccggtggcggaatatgcc
gccaacctcgtgaagaagaccgtggccgggaacggccacgcggagaaggttcagatccag
gcgatggtgaagttccttctgccgaaggcggagttcaagctcgccgacgcagccgacgcg
ctcgccatcgcgatcactcatgccagccaccgcggggccatcgccctcgaccgccgccac
gccgtggccgtgggcgggggaccgggcgcggcccggatcgccgcggcgctggcgcggctc
gaccggtaa |
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