Methylorubrum extorquens DM4: METDI1125
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Entry
METDI1125 CDS
T00947
Symbol
qscR
Name
(GenBank) assimilatory C1 metabolism transcriptional regulator QscR, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI1125 (qscR)
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
METDI1125 (qscR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_28
HTH_20
HTH_30
HTH_8
Motif
Other DBs
NCBI-ProteinID:
CAX22742
UniProt:
C7CE38
LinkDB
All DBs
Position
complement(1035017..1036003)
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AA seq
328 aa
AA seq
DB search
MRNLSLKQLQAVAAVARLGTMTRAAQELNVTSAALYARIRQLEEEAGLLLFDRTPTGLKP
TDAGREMLWAINSINTVLETCTDRLRTLKGGGGGRVGLGVVSTAKYFAPLVIAGFMETHP
KVEISLTVGNRQDTIEALRNYDIDFAIMGRPPRDFAIEAETFGPHPLVLIAAPDHPMAGR
RGLTRADLAEESFLVREEGSGTRSVFEEFMNGVMIRRAKLGIDSGSNETLKQAVMAGLGI
ALLSGHSVAAEVASGRLVLLDVEGLPIRRDWYVVRRADKVLGPASDAFWDYLAQEGRRFL
PSIPGDFFPEDSAAPPLKAVRSPAEAGE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatctttcgctcaagcagctccaggcggtcgccgcagtcgcacggctcggcaca
atgacgcgggccgcgcaggagcttaacgtcacctccgccgcgctctacgcacgcatccgc
cagctcgaggaggaggcgggcctcctcctgttcgaccgcacgccgaccggcctcaagccg
accgatgcgggccgggagatgctgtgggcgatcaacagcatcaacaccgtgctggagacc
tgcaccgaccgcttgcgcaccctgaagggcggcggcggcggccgggtcggcctcggggtc
gtttccacggcgaagtatttcgcgccgctcgtcattgctggcttcatggagacccatccc
aaggtcgagatctcgctcaccgtcggcaaccggcaggacacgatcgaggcgctgcgcaac
tacgacatcgatttcgcgatcatgggccgcccgccgcgggacttcgccatcgaggcggag
acattcggcccccatcccctggtgctgatcgccgcccccgaccacccgatggccgggcgg
cgcggcctgacgcgggcggatctggccgaggaatccttcctcgtgcgcgaggaggggtcg
ggcacccgctcggtgttcgaggagttcatgaacggtgtgatgatccgccgggccaagctc
gggatcgattccggctcgaacgagacgctgaagcaggcggtgatggcgggcctcggcatc
gcgctcctgtccggccactcggtggcggcggaggtggcgagcgggcgcctcgtcctcctc
gacgtggagggcctgccgatccggcgcgactggtacgtcgtgcgccgcgccgacaaggtg
ctcggtccggcctccgacgcgttctgggactatctcgcgcaggaggggcgccgcttcctg
ccgagcattcccggcgatttcttcccggaggactcggccgcgccgccgctcaaggcggtc
cgcagcccggccgaggctggcgaatga
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