Methylorubrum extorquens DM4: METDI1725
Help
Entry
METDI1725 CDS
T00947
Name
(GenBank) putative two-component sigma-54 specific transcriptional regulator, Fis subfamily; with N-terminal response receiver, GAF and ATPase domains
KO
K02584
Nif-specific regulatory protein
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
METDI1725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdi03000
]
METDI1725
Transcription factors [BR:
mdi03000
]
Prokaryotic type
Helix-turn-helix
Other families
METDI1725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
Mg_chelatase
GAF_3
AAA
AAA_2
AAA_16
HTH_23
HTH_28
HTH_29
AAA_22
DUF815
Motif
Other DBs
NCBI-ProteinID:
CAX23322
UniProt:
C7CHN8
LinkDB
All DBs
Position
complement(1589769..1591373)
Genome browser
AA seq
534 aa
AA seq
DB search
MDGSLKSASSTHWRTQEMFLVQEVMNLIGKGLRLDQVAREMLHLLSEIVGLNRGRIVLKD
PDGKGHRIAYAYGLTREEVARGRYAPGEGITGRVIQDGHLIIVQDIDKDPTFLGRAVARA
QLPRGAVSFLALPIRVDHRTVGAIACHRIRHRERALSDDLTILRIIATMVSQLLTLNERV
EQKTRALEEHNDMLARELRIKRARYGIIGTSPALLRALAQVEKVAAATASVLLLGESGTG
KELFARALHLASQRRDRPFIKVNCAAIPDSLFESELFGHERGAFTGAVDARAGWFEQASG
GTIFLDEIGEMPAVLQTKLLRTLQEGTVVRLGGKREIRVNMRLVAATNRDLATEVAHGRF
REDLFYRLNVVPITLPPLAERRSDIPDLVLHFLTQANQNNQRNVNLTQGAVTHLARQSWP
GNIRQLANFIERLVLLASEGVLDVEDVRPMLEGAVVTAPPLLAPASAPFFSPEREAALRA
MGTVRPYLPADSHGHEQLRMALAQAGGNKTRAAQRLGLTERQFSYRWRKLQPAP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagcctcaagagcgcgtcgagcacacactggcgtacgcaggagatgttcctc
gtccaggaggtcatgaacctgatcggcaagggcctgcgcctggatcaggtcgcgcgggag
atgctgcatctcctgtccgagatcgtcggactgaaccggggacggatcgttctgaaagac
cccgacggcaagggacaccgcattgcctacgcctatgggctgacccgcgaggaggtcgct
cggggccgctacgcgccgggcgagggcatcaccggacgcgtcatccaggacggtcacctc
atcatcgtgcaggacatcgacaaggacccgaccttccttgggcgggcggtggcgcgggcg
cagcttccccgcggcgcggtgtcgttcctcgcgctgccgatccgcgttgatcaccggacg
gtcggcgccattgcctgccaccgcattcgccaccgggagcgggcgctctcggacgatctc
accatcctgcgcatcatcgccacgatggtcagccagttgctgaccctgaacgagcgggtg
gagcagaagacgcgggcgctcgaggagcacaacgacatgctggcgcgcgagctgcgcatc
aagcgcgcccgttacggcatcatcggaacctcgcccgcgctgctgcgcgcgctcgcgcag
gtagaaaaggtcgcggccgcgaccgcgagcgtgctgctgctcggcgagtccgggaccggc
aaggagctcttcgcccgggcgctccacctcgcgagccagcggcgcgaccggcccttcatc
aaggtcaattgcgcggcgatccccgacagcctgttcgaatccgagctgttcgggcacgag
cgcggcgccttcaccggggctgtcgatgcgcgggccggctggttcgagcaggcgagcggc
ggcacgatcttcctcgacgagatcggcgagatgccggccgtcctccagaccaagctgctg
cgcacccttcaggaggggacggtcgtgcgcctcggcggcaagcgcgagatccgggtcaat
atgcgcctcgtcgccgcgacgaaccgggatctcgccaccgaggtcgcccatggccgcttc
cgagaggacttgttctaccgcctcaacgtcgtgccgatcaccctgcctccgctggcggag
cggcgcagcgacatccccgatctggtgctgcacttcctcacccaggcgaaccagaacaac
cagcgcaacgtcaacctgacccagggcgcggtcacgcatctcgcccgccagtcctggccg
ggcaacatccgccagctcgccaacttcatcgagcggctcgtgctgctggcgagcgaaggt
gtcttggacgtcgaggacgtgcgaccgatgctcgaaggcgccgtcgtcacggcgcccccg
ttgcttgctcccgcctcggccccgttcttctcgcccgaacgggaagcggcgttgcgcgcg
atgggcaccgtgcgcccctacctgccggccgactcgcacggccacgaacagttgcgcatg
gccctggcccaggccggcggcaacaaaacgcgggcggcccaacgcctcgggctcactgag
cgccaattctcctatcgctggcgcaagctccagccggcaccctga
DBGET
integrated database retrieval system
