Methylorubrum extorquens DM4: METDI1876
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Entry
METDI1876 CDS
T00947
Name
(GenBank) ABC transporter, periplasmic protein (tat pathway signal)
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02010
ABC transporters
mdi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
METDI1876
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METDI1876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdi02000
]
METDI1876
Transporters [BR:
mdi02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
METDI1876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
CAX23466
UniProt:
C7CIP7
LinkDB
All DBs
Position
complement(1756218..1757495)
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AA seq
425 aa
AA seq
DB search
MSPRDDRERTMIRQGPGYGAVSRRTLVRGMAAAGTLAGIGMPFVARAAEPIRIGFPTPVT
GPFGAEAKDQIRSAELAVKQFNEAGGLNGRMAELLVRDDKLNPGEAATRTLELIEKDRAH
FIVGALSSAVQLSVNEITRSRKVLYVSISQSDTINEAKDFSRHTFHEALNPHMTTAAVAK
HAFKKGTRVAYLVADYAYGHEMLRGFKRAAAAIGAETAGEILHPFGAPDYSTFMPRLRSM
RPDILCICNFGRDQANSIKQANDFGLKKAARIVVPVLLHNQRLAGGADAFEGVVGASNYY
WRLEETVPSAKAFNDAFRAAYAGAVPTDYGAYGYTAVRSLLMAVQAAGDTDTDRVIAALE
ALQYDVAKGPERYRACDHQAIQSVLITESKKKSEMQGEADLFKILEVEPGAEAMLRSCDE
LGHRA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgcgacgacagggagagaacgatgatccgacagggaccgggatacggcgcc
gtctcgcgccggacgctcgtgcggggcatggccgcggccggcacgctcgccgggatcggc
atgcccttcgtcgcccgggcggcggagccgatccgcatcggcttcccgacgccggtcacc
ggcccgttcggcgccgaggcgaaggaccagatccgctcggcggagctggccgtgaagcag
ttcaacgaggctggcggcctgaacggccgcatggccgagctgctggtgcgcgacgacaag
ctcaaccccggcgaggccgcgacccggacgctggagctgatcgagaaggaccgggctcac
ttcatcgtcggcgccctgtcgagcgcggtgcagctctcggtcaacgagatcacccgctcg
cgaaaggtcctctacgtgtcgatcagccagtcggacacgatcaacgaggccaaggatttc
agccgccacaccttccacgaggccctgaacccgcacatgaccaccgcggcagtggccaag
cacgccttcaagaagggcacgcgggtcgcctacctcgtcgccgactacgcctacggccac
gagatgctgcgcggcttcaagcgcgcggcggccgccatcggggccgagacggcgggcgag
atcctgcacccgttcggcgcgcccgactactcgaccttcatgccgcgcctgcgctcgatg
cgcccggacatcctctgcatctgcaatttcggccgcgaccaggccaacagcatcaagcag
gccaacgatttcgggctgaagaaggccgcgcggatcgtcgtgccggtgctgctgcacaac
cagcgcctcgcgggcggtgccgacgccttcgagggcgtggtgggcgccagcaactactac
tggcgtctcgaagagacggtgccctcggccaaggccttcaacgacgccttccgcgccgcc
tatgccggcgcggtgcccaccgattacggtgcctacggctacaccgccgtgcgctccctg
ctgatggcggtgcaggcggcgggcgacaccgatacggaccgggtgatcgcggcgctggag
gcgctgcaatacgacgtcgccaagggccccgagcgctaccgggcctgcgaccaccaagcg
atccagtcggtgctcatcacggaatccaagaagaagtccgagatgcagggcgaggccgac
ctgttcaagatcctcgaggtcgagccgggcgcggaggcgatgctgcgctcctgcgacgaa
ctcggccaccgggcctga
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