Methylorubrum extorquens DM4: METDI2007
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Entry
METDI2007 CDS
T00947
Name
(GenBank) putative ABC transporter related, fused ATPase and permease domains (CydD-like)
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
METDI2007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdi02000
]
METDI2007
Transporters [BR:
mdi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
METDI2007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_28
AAA_30
AAA
NACHT
MobB
ORC-CDC6-like
RsgA_GTPase
PduV-EutP
AAA_29
AAA_23
nSTAND3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAX23596
UniProt:
C7CJV6
LinkDB
All DBs
Position
complement(1876064..1877719)
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AA seq
551 aa
AA seq
DB search
MHRPRRNPFREAGGLMRTRSDTTPTGSGRAWTLAFALAALALAANLALAGTAVSFLAAVA
LAGAGPATFAFNFHHPAALVRLFALLRTGARYGERMAGHRAALSDQIRRRAGLFAALARA
PESRGAGWQLGRPERLADFIDDVADIDYARLRVGFPLAMTVAALAGLVLATALVAPLALL
PAAVLALAGGLVARHALMRLAAIEAWVRRARRTAAADLGAALAGAVPLDAEARRGPALRI
ALDPLRDAEREAACGKRALARLEAVLALAGPALALAVLLAAWSAGARGTGLLPAAFLAFT
WLALAEPILSLPRALLGSVRARLARQSLAVEEGVAAEPDPRPGPALGALTLHSLCLRAPD
GRDLGPAPELAIVPGTPLTLVGASGCGKTTLLKALAGWSAERPGETIRLGGTVRPAAERR
ALTHLSLHDAAILSDTVRENLFAPGASDAALWAALEAVELDARVRAAGGLDAWIAEGGLS
LGEAQRLNLARAWLSPAPVILLDEPAEHLGDDQAARILGRLLANWHDRIVVLTSHRPDLR
LPGRRVSLGPD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcgccctcggcgcaatccattccgagaagcaggcggcctgatgcgcacccgctcc
gacacgacgccgactggttccggccgcgcctggactctcgccttcgccctcgcggccctg
gcgctcgcggcgaatctcgcgctcgccggcaccgccgtgagcttcctggcggcggtggcc
ctggccggggccgggccggcgaccttcgccttcaacttccaccatcccgccgcgctcgtg
cggctgttcgcgctgctgcgcacgggcgcgcgctacggtgagcgcatggccggccaccgc
gcggcgctgagcgatcagatccgccgccgcgccggcctgttcgcggccctggcacgggcg
ccggagagccgcggcgccggctggcaactcgggcgcccggagcggctcgccgacttcatc
gacgacgtggccgacatcgactacgcccggctgcgcgtcggctttcccctcgccatgacg
gtcgcggcgcttgccggcctcgtgctcgccacggccctcgtggcaccgctcgcgctcctt
cccgccgcagtgctcgcgctggccggtggcctcgtcgcccgacacgcgctgatgcggctc
gcggcgatcgaggcgtgggtccgccgcgcacggcgcaccgctgccgccgatctcggagcg
gctttggcgggcgcggtgcccctcgacgccgaggcgcggcgcggcccggcccttcggatc
gccctcgatcccctgcgcgatgccgaacgcgaggccgcctgcggaaagcgggcgctcgcc
cggctcgaggccgtgctggcgctggccggtcccgccctcgccctggccgtgctgctcgcg
gcctggagcgcgggagcccgcggcaccgggctcctgcccgccgccttcctggccttcacc
tggctcgccctcgcggagccgatcctgtccctgccacgggcgctgctcggctccgtccgc
gcccgcctcgcccgccaatccctcgcggtggaggagggcgtcgccgcggagcctgacccc
cggcccggtccggccctcggtgccctgaccctgcacagcctgtgcttgcgggcgccggac
gggcgcgatctcggcccggcgccggagttggccatcgtgcccggcacgccgctgaccctc
gtcggcgccagcggctgcggcaagaccaccctgctgaaggcgctcgccggctggagcgcg
gagcggcccggcgagacgatccggctcggcgggacggtgcggccggcggcggagcggcgg
gcgctgacgcatctgagcctgcacgatgcggcgatcctgtccgacaccgtccgcgagaac
ctgttcgcgcccggcgcctccgacgcggctttgtgggcggcgctggaggctgtcgaactc
gacgcccgcgtccgcgcggctggcggcctcgatgcctggatcgccgaggggggcctttcg
ctgggcgaagcgcaacgcctcaacctcgcccgcgcttggctgagcccggcccccgtcatc
ctcctcgatgagccggccgagcatctcggcgacgatcaggccgcgcgcatcctcgggcgc
ctgctcgcgaactggcatgacagaatcgtcgtgctgacgagtcaccgcccggatctcagg
ctgcccgggcgccgggtctcgctcgggccggattga
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